Pairwise Alignments

Query, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  378 bits (970), Expect = e-109
 Identities = 198/411 (48%), Positives = 265/411 (64%), Gaps = 16/411 (3%)

Query: 28  LAGVAPMSQAA-FFEDSTATFETRNMYFNRDFRD--GTSAQ-----QSKRDEWAQGFILN 79
           L G  P++ AA F EDS    + RN+YFN +FRD  G SA+     +S+R EWAQGF+L+
Sbjct: 14  LCGWLPVAGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLD 73

Query: 80  FESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDGKAADEYSKLGLTGKVKIS 139
           ++SG+T GT+G G+DA+G+LG++LDS   R+ +GLLP HDDG+AADE++  G+T K ++ 
Sbjct: 74  YQSGFTQGTLGLGVDAMGLLGVRLDSGRGRSGTGLLPVHDDGRAADEFASAGITAKARLG 133

Query: 140 QTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKAKDRNDTNWE 199
            T +K GTL+P+ P L  ND R+LPQT++G  LTS +I  LT T G +D+ K R+ ++  
Sbjct: 134 STVVKHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSDST 193

Query: 200 DLALNNKNGRFGGTFSADNLALGGLDYQFTDRITGSYHFAQLDDIYRQHFIGMVATQPWG 259
            L L+   G   G FS       G DY  + ++  SY   +L+  YRQ F G+V   P G
Sbjct: 194 GLYLDGYGGPASGDFS-----FAGADYAVSKQLRLSYFHGELEHFYRQDFAGLVHDLPLG 248

Query: 260 PGTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGGHKVSAAWQQLSGESAFPYVDG 319
            G L  DLR   S D+G A  G IDN   +G LSYA  GH V A +Q L GE+  PY+ G
Sbjct: 249 GGVLTTDLRYFKSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQVLDGEAGLPYISG 308

Query: 320 ADPYLVNFVQINDFAGADERSWQARYDYNFAALGVPGLTFMTRYISGDNVSRAAGGEG-K 378
           A  Y  + V I  F   +E++W A Y YNFAA GVPGLTFMTRY+SGDN    +GGEG K
Sbjct: 309 ATVYSFSNVGIGKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYLSGDN--GRSGGEGIK 366

Query: 379 EWERNTELKYVVQSGPLKNVAVRLRNATFRSNFARDADEVRLLVSYSVALW 429
           EWER+ E+ YVVQ GPLK + V+LRN  +RS+FAR  D  RL ++Y +A+W
Sbjct: 367 EWERDAEIAYVVQGGPLKGLGVKLRNYVYRSDFARGRDSNRLYLTYDIAIW 417