Pairwise Alignments

Query, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

Subject, 412 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  314 bits (805), Expect = 3e-90
 Identities = 177/413 (42%), Positives = 247/413 (59%), Gaps = 12/413 (2%)

Query: 19  PSAIASALALAGVAPMSQAA-FFEDSTATFETRNMYFNRDFRDGTSAQQSKRDEWAQGFI 77
           P A+  A  +AG+   S AA F ED  AT   RN Y NR+F +  S  QSK +EW Q FI
Sbjct: 8   PFALLGAGVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTN-PSNPQSKAEEWTQSFI 66

Query: 78  LNFESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDGKAADEYSKLGLTGKVK 137
           L+  SG+T+G +GFG+D LG+  +KLD       + LLP HDDG+ AD+Y +L + GK +
Sbjct: 67  LDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTALLPRHDDGRPADDYGRLAVAGKAR 126

Query: 138 ISQTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKAKDRNDTN 197
           IS+TELKIG  +P LP L+ +DGR LPQTF GG +TS EI GLT  GG+      RND +
Sbjct: 127 ISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDAS 186

Query: 198 WEDLALNNKNGRFGGTFSADNLALGGLDYQFT-DRITGSYHFAQLDDIYRQHFIGMVATQ 256
            ED++       +GG  S D     G +Y+F  DR       A L D+Y+Q ++ +  +Q
Sbjct: 187 MEDMS-------YGGGVS-DRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQ 238

Query: 257 PWGPGTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGGHKVSAAWQQLSGESAFPY 316
           P G  TLGA+L     D+ G+ +AG +DN T +GM S   GG       Q++ G++    
Sbjct: 239 PVGDWTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDGDTWMRV 298

Query: 317 VDGADPYLVNFVQINDFAGADERSWQARYDYNFAALGVPGLTFMTRYISGDNVSRAAGGE 376
              +   L N    + F  A+ERSWQ R+D+NF  +GVPGLT M RYISG +V      +
Sbjct: 299 NGTSGGTLANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNRYISGRDVHSGGVTD 358

Query: 377 GKEWERNTELKYVVQSGPLKNVAVRLRNATFRSNFA-RDADEVRLLVSYSVAL 428
           GKEW R TEL YV+QSG  K+++V+ RN++ R +++  + DE RL+ +Y ++L
Sbjct: 359 GKEWVRETELAYVIQSGAFKDLSVKWRNSSIRRDYSNNEFDENRLIFNYPLSL 411