Pairwise Alignments

Query, 230 a.a., ribosomal small subunit pseudouridine synthase A from Pseudomonas putida KT2440

Subject, 455 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Sphingobium sp. HT1-2

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 9/231 (3%)

Query: 2   RLDRFLANLPSYNRQNVRLMLAQRRVRVDGQVVSDPLTDVREFSRVELDEQLLQAGRPAR 61
           R+ + LA     +R+ +  M+ + R+  DG  +  P T +     V +D   + A  PAR
Sbjct: 217 RIAKLLARAGIASRREIERMIEEGRIARDGVTIDTPATLLTSLHGVTVDGDPVAAPAPAR 276

Query: 62  YLMLYKPTGCVSATHDPQHR-TVLDLLPAALRDDLHIAGRLDFNTTGLMILTNDGQWSRR 120
             + +KPTG ++   DP  R T+ D+LP  L   + I GRLD NT GL++LT DG++ R 
Sbjct: 277 LFLFHKPTGFLTTERDPAGRPTIYDILPDDLPRLMPI-GRLDMNTEGLLLLTTDGEFKRE 335

Query: 121 LTQPATKLPKHYLVDTEDEIGEHYVAKFREGFYFAFEDLTTQPAQLDI---LGPHR-ARL 176
           +  PAT +P+ Y      E+ +  +    +G     + +   P + ++    G ++   +
Sbjct: 336 MELPATGVPRTYRARAFGEVSQQQLEDLFDG--IEIDGIQYGPIEANLERRTGRNQWIEM 393

Query: 177 AIVEGRYHQVKRMFGHFNNKVIGLHRESMGAIRLDPGLAPGEYRELTANEI 227
            + EG+  +V+R+  HF  KV  L R S G   L   LA G   E+  +++
Sbjct: 394 TLTEGKNREVRRVLEHFELKVNRLIRTSYGPFELGE-LAGGAVEEVRQHDL 443