Pairwise Alignments

Query, 230 a.a., ribosomal small subunit pseudouridine synthase A from Pseudomonas putida KT2440

Subject, 245 a.a., Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 73.2 bits (178), Expect = 4e-18
 Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 26/185 (14%)

Query: 58  RPARYLMLYKPTGCVSA-THDPQHRTVLDLLPAALRDDLHIAGRLDFNTTGLMILTNDGQ 116
           +P R ++  KP   +   T +   RT+ D +P      ++ AGRLD ++ GL++LTNDG 
Sbjct: 61  QPKRVVLFNKPYDVLPQFTDEAGRRTLKDFIPV---QGVYAAGRLDRDSEGLLVLTNDGA 117

Query: 117 WSRRLTQPATKLPKHYLVDTEDEIGEHYVAKFREGFYFAFEDLTTQPAQLDILG------ 170
              RLTQP  +  K Y V  E       +   R G      D  T PA ++I+       
Sbjct: 118 LQARLTQPGKRTGKIYYVQVEGIPDNAALQALRTG--VTLNDGPTLPAGIEIVAEPDWLW 175

Query: 171 ----PHRAR---------LAIVEGRYHQVKRMFGHFNNKVIGLHRESMGAIRLDPGLAPG 217
               P R R         + + EGR  QV+RM  H  +  + L R SMG   L+ GL  G
Sbjct: 176 PRTPPIRERKNIPTSWLKVTLYEGRNRQVRRMTAHVGHPTLRLIRYSMGDYTLN-GLDNG 234

Query: 218 EYREL 222
           ++RE+
Sbjct: 235 QWREI 239