Pairwise Alignments

Query, 230 a.a., ribosomal small subunit pseudouridine synthase A from Pseudomonas putida KT2440

Subject, 296 a.a., 23S rRNA pseudouridine(2605) synthase RluB from Dickeya dianthicola ME23

 Score = 86.3 bits (212), Expect = 6e-22
 Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 16/238 (6%)

Query: 2   RLDRFLANLPSYNRQNVRLMLAQRRVRVDGQVVS-DPLTDVREFSRVELDEQLLQAGRP- 59
           +L + LA     +R+ +  M+   R+ VDG++ +     +V   +++ LD  ++      
Sbjct: 4   KLQKVLARAGHGSRREIESMIEAGRISVDGKIATLGDRVEVTRATKIRLDGHVVSVRETE 63

Query: 60  ---ARYLMLYKPTGCVSATHDPQHR-TVLDLLPAALRDDLHIAGRLDFNTTGLMILTNDG 115
               R LM YKP G +    DP+ R TV D LP          GRLD NT+GL++ T DG
Sbjct: 64  ETVCRVLMYYKPEGELCTRSDPEGRPTVFDRLPRIQGYRWVAVGRLDVNTSGLLLFTTDG 123

Query: 116 QWSRRLTQPATKLPKHYLVDTEDEIGEHYVAKFREGFYF-----AFEDLTTQPAQLDILG 170
           + + RL  P+ ++ + Y V    E+G+  + +  +G        AF  +  Q  +    G
Sbjct: 124 ELANRLMHPSREVEREYAVRVFGEVGDDKIRQLSKGVQLEDGPAAFRSIRYQGGE----G 179

Query: 171 PHR-ARLAIVEGRYHQVKRMFGHFNNKVIGLHRESMGAIRLDPGLAPGEYRELTANEI 227
            ++   + + EGR  +V+R++     +V  L R   G I+L  G+  G + E+   ++
Sbjct: 180 LNQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIQLPKGVPRGGWMEMGLTDV 237