Pairwise Alignments

Query, 230 a.a., ribosomal small subunit pseudouridine synthase A from Pseudomonas putida KT2440

Subject, 232 a.a., 16S rRNA pseudouridine(516) synthase RsuA from Dickeya dianthicola ME23

 Score =  181 bits (458), Expect = 1e-50
 Identities = 98/230 (42%), Positives = 131/230 (56%)

Query: 1   MRLDRFLANLPSYNRQNVRLMLAQRRVRVDGQVVSDPLTDVREFSRVELDEQLLQAGRPA 60
           MRLD+FL+     +R  +   L  +RV V+G+VV      +     V  D+ +L+     
Sbjct: 1   MRLDKFLSQQLGISRSLIVRELRAQRVTVNGEVVKSGAFKLLPDHEVTFDDNVLEQQNGP 60

Query: 61  RYLMLYKPTGCVSATHDPQHRTVLDLLPAALRDDLHIAGRLDFNTTGLMILTNDGQWSRR 120
           RY ML KP G V +T DP H T+L  +   + + LH AGRLD +T+GL++LT+DGQWS R
Sbjct: 61  RYFMLNKPQGYVCSTDDPDHPTILYFIDEPVANKLHAAGRLDIDTSGLVLLTDDGQWSHR 120

Query: 121 LTQPATKLPKHYLVDTEDEIGEHYVAKFREGFYFAFEDLTTQPAQLDILGPHRARLAIVE 180
           +T P     K YLV  E  +       F+ G     E   T+PA L+ +  ++ RL I E
Sbjct: 121 ITSPKHHCEKTYLVTLEQPLAPDTADNFQAGVQLHGEKDLTRPATLEPVSEYQVRLTISE 180

Query: 181 GRYHQVKRMFGHFNNKVIGLHRESMGAIRLDPGLAPGEYRELTANEIATV 230
           GRYHQVKRMF    N V+ LHRE +GAI LD  L PGEYR LT  E+A +
Sbjct: 181 GRYHQVKRMFAAVGNHVVALHRERIGAITLDDALEPGEYRPLTPEEVAGI 230