Pairwise Alignments

Query, 230 a.a., ribosomal small subunit pseudouridine synthase A from Pseudomonas putida KT2440

Subject, 381 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  102 bits (254), Expect = 1e-26
 Identities = 69/230 (30%), Positives = 123/230 (53%), Gaps = 7/230 (3%)

Query: 1   MRLDRFLANLPSYNRQNVRLMLAQRRVRVDGQVVSDPLTDVREFSRVELDEQLLQAGRPA 60
           +RL++++AN    +R++   ++ +  V+V+G+V+++    V    +V    +L+   +P 
Sbjct: 148 IRLNKYIANAGICSRRDADKLIEKGEVKVNGEVITELGYRVLLTDKVVYKGKLINPEKPV 207

Query: 61  RYLMLYKPTGCVSATHDPQHR-TVLDLLPAALRDDLHIAGRLDFNTTGLMILTNDGQWSR 119
            Y++L KP   ++ T DP +R TV+ L+ +A  + +   GRLD NTTGL++ TNDG+ + 
Sbjct: 208 -YVLLNKPKDFITTTDDPMNRKTVMHLVSSACEERIFPVGRLDRNTTGLLLFTNDGELAA 266

Query: 120 RLTQPATKLPKHYLVDTEDEIGEHYVAKFREGFYFAFEDLTTQPAQLDILGPHRA--RLA 177
           +L+ PA K+ K Y V  +  I + +  +  EG     ED       + IL   R    L 
Sbjct: 267 KLSHPAEKVRKIYQVTLDSPITKTHFEEIAEG--LTLEDGLVNVDDIQILSKDRTILGLE 324

Query: 178 IVEGRYHQVKRMFGHFNNKVIGLHRESMGAIRLDPGLAPGEYRELTANEI 227
           I  G+   V+R+F H   +V+ L R +   +     L+ G++R LT  E+
Sbjct: 325 IHVGKNRIVRRIFAHLGYEVVALDRVTYAGL-TKKDLSRGKWRFLTEKEV 373