Pairwise Alignments

Query, 230 a.a., ribosomal small subunit pseudouridine synthase A from Pseudomonas putida KT2440

Subject, 517 a.a., pseudouridine synthase from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 20/245 (8%)

Query: 2   RLDRFLANLPSYNRQNVRLMLAQRRVRVDGQVVSDPLTDVREFSRVELDEQLLQAGRPAR 61
           R+ + +A     +R+ V  ++   +V V+G+++  P T V     + +D + + + +  R
Sbjct: 98  RIAKTMARAGIASRREVERLIGLGKVAVNGRILDTPATLVTRDDVITVDGKPIGSTQATR 157

Query: 62  YLMLYKPTGCVSATHDPQHR-TVLDLLPAALRDDLHIAGRLDFNTTGLMILTNDGQWSRR 120
               +KP G +++  DP  R TV D LPA L   + + GRLD  T GL++LTNDG+ SR 
Sbjct: 158 VWRYHKPAGLLTSHSDPTGRPTVFDALPAGLPRVISV-GRLDLATEGLLLLTNDGELSRA 216

Query: 121 LTQPATKLPKHYLVDTEDEIGEHYVAKFREGFYFAFEDLTTQPAQLDILGPHRAR----- 175
           L  P+T L + Y      +I +  +   ++G            A+LD     ++      
Sbjct: 217 LELPSTSLVRQYRARARGKITQEQLDALKDGVVVDGVSYGPIEAKLDKAKESKSEDGKAP 276

Query: 176 ------LAIVEGRYHQVKRMFGHFNNKVIGLHRESMGAIRLD-------PGLAPGEYREL 222
                 ++I EG+  +V+++       V  L R + G  RLD         + P   REL
Sbjct: 277 ANLWISVSITEGKNREVRKVLESVGLTVNRLIRLAYGPFRLDVLPIGSVEEVGPRVIREL 336

Query: 223 TANEI 227
            A+ I
Sbjct: 337 LADYI 341