Pairwise Alignments

Query, 230 a.a., ribosomal small subunit pseudouridine synthase A from Pseudomonas putida KT2440

Subject, 301 a.a., Ribosomal large subunit pseudouridine synthase B from Acinetobacter radioresistens SK82

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 30/244 (12%)

Query: 2   RLDRFLANLPSYNRQNVRLMLAQRRVRVDGQVVSDPLTDVREFSRVELDEQLLQAGRPAR 61
           +L + LA +   +R+ +  ++A  RV V+G+V       V E  R+E  ++L   GR  +
Sbjct: 4   KLQKVLARIGLGSRRYMEEVIAAGRVSVNGRVAQ-----VGE--RIEPGDELRIDGRKVQ 56

Query: 62  Y----------LMLYKPTGCVSATHDPQHR-TVLDLLPAALRDDLHIAGRLDFNTTGLMI 110
           +          L+ YKP G + + +DP+ R TV D LP    D   + GRLD N+TGL++
Sbjct: 57  FQIEDEIRRRVLIYYKPEGEICSRNDPESRPTVFDHLPTIANDRWVMVGRLDINSTGLLL 116

Query: 111 LTNDGQWSRRLTQPATKLPKHYLVDTEDEIGEHYVAKFREGFYFAFEDLTTQPAQLDIL- 169
            TNDG+ + RL  P+ ++ + Y V    E+          G       L   PA+ +   
Sbjct: 117 FTNDGELANRLMHPSNEIEREYAVRVMGEVTPQIRQNMLNGVV-----LDDGPAKFESFS 171

Query: 170 -----GPHR-ARLAIVEGRYHQVKRMFGHFNNKVIGLHRESMGAIRLDPGLAPGEYRELT 223
                G +R  ++ + EGR  +V+R+F     KV  L R   G + L   L  G + EL 
Sbjct: 172 EIGGDGINRWYQVVVKEGRNREVRRIFESQGLKVSRLLRTRYGTVILPRELRTGRWIELD 231

Query: 224 ANEI 227
             +I
Sbjct: 232 KADI 235