Pairwise Alignments

Query, 444 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

Subject, 463 a.a., DNA-binding transcriptional regulator NtrC from Methylophilus sp. DMC18

 Score =  292 bits (748), Expect = 1e-83
 Identities = 161/381 (42%), Positives = 231/381 (60%), Gaps = 6/381 (1%)

Query: 2   LNSVIVVDDEASIRTAVEQWLSLSGFSVELFARAEACLAHLPQHFPGVIISDVRMPGMDG 61
           +  + ++DD+ SIR   E+ L+ + F  + F+     L  L +  P VI+SD+RMP   G
Sbjct: 1   MKPIWILDDDKSIRWVFEKALARTDFDFKTFSSPAEALNALNREQPQVIVSDIRMPNGSG 60

Query: 62  LQLLERLQANDPDLPVILLTGHGDVPMAVEAMRSGAYDFLEKPFTPQDLLGSLRRALEKR 121
           L  L  ++   P++PVI++T + D+  AV A + GA+++L KPF     +  ++RA+E  
Sbjct: 61  LDFLSEVKQRFPEIPVIIMTAYSDLESAVAAFQGGAFEYLAKPFDVDQAIEIIKRAVE-- 118

Query: 122 QLVLENRRLHEQADLKSRLEGTLLGMSQGLQQLRRQVLDLAGLPVNVLIRGETGSGKERV 181
               E+ R   +A   +     ++G +  +Q++ R +  L+     VLI GE+GSGKE V
Sbjct: 119 ----ESMRQSVEAVEDTGPSPEIIGQAPAMQEVFRAIGRLSRSHSTVLINGESGSGKELV 174

Query: 182 ARCLHDFGPRAAKPFVALNCAAIPESLFEAELFGHESGAFTGAQGKRIGKLEYANGGTVF 241
           A  LH   PRA KPF+A+N AAIP+ L E+ELFGHE GAFTGA   R G+ E A+ GT+F
Sbjct: 175 ASALHRHSPRADKPFIAINTAAIPKDLLESELFGHERGAFTGAAAARRGRFEQADNGTLF 234

Query: 242 LDEIESMPLAQQAKLLRVIQEQKLERLGANQSISVDLRIIAATKPDLLEEARAGRFREDL 301
           LDEI  MP   Q +LLRV+ + +  R+G +Q I V++R+IAAT  DL E  + G FREDL
Sbjct: 235 LDEIGDMPADLQTRLLRVLSDGQFYRVGGHQPIKVNVRVIAATHQDLEERVKQGLFREDL 294

Query: 302 AYRLNVAELRLAPLRERREDIPLLFEHFARAAGEKLGRAAPPLSGAQLAQLLSHDWPGNV 361
            +RLNV  LRL PLRERREDIPLL +HF   + ++LG     LS A +  L+S +W GNV
Sbjct: 295 FHRLNVIRLRLPPLRERREDIPLLTKHFLAHSAQQLGVEPKQLSQAAIKYLMSVNWSGNV 354

Query: 362 RELANAAERHALGLGSPNIEV 382
           R+L N      +     N++V
Sbjct: 355 RQLENVCHWLTVMAPGQNVDV 375