Pairwise Alignments

Query, 444 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

Subject, 441 a.a., fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  295 bits (755), Expect = 2e-84
 Identities = 173/440 (39%), Positives = 253/440 (57%), Gaps = 18/440 (4%)

Query: 5   VIVVDDEASIRTAVEQWLSLSGFSVELFARAEACLAHLPQHFPGVIISDVRMPGMDGLQL 64
           ++VVDD+ S  T ++  L   G++V L       L  + +    +++ DVRM  MDG+  
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIAT 67

Query: 65  LERLQANDPDLPVILLTGHGDVPMAVEAMRSGAYDFLEKPFTPQDLLGSLRRALEKRQLV 124
           L+ ++A +P +PV+++T +  V  AVEA+++GA D+L KP    +L  +L +AL      
Sbjct: 68  LKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALA----- 122

Query: 125 LENRRLHEQADLKSRLEGTLLGMSQGLQQLRRQVLDLAGLPVNVLIRGETGSGKERVARC 184
                +  +    +  +  ++G S  +Q L  ++  +A     VLI G++G+GKE VAR 
Sbjct: 123 -HTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARA 181

Query: 185 LHDFGPRAAKPFVALNCAAIPESLFEAELFGHESGAFTGAQGKRIGKLEYANGGTVFLDE 244
           +H    R+ KP V LNCAA+ ESL E+ELFGHE GAFTGA  +R G+   A+GGT+FLDE
Sbjct: 182 IHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDE 241

Query: 245 IESMPLAQQAKLLRVIQEQKLERLGANQSISVDLRIIAATKPDLLEEARAGRFREDLAYR 304
           I  +    Q +LLR IQE++++R+G+NQ ISVD+R+IAAT  DL  E  AGRFR+DL YR
Sbjct: 242 IGDISPMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVNAGRFRQDLYYR 301

Query: 305 LNVAELRLAPLRERREDIPLLFEHFARAAGEKLGRAAPPLSGAQLAQLLSHDWPGNVREL 364
           LNV  + +  LR+RREDIPLL  HF +   E+  +A    +   +  L+ +DWPGN+REL
Sbjct: 302 LNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIREL 361

Query: 365 ANAAERHALGLGSPNIE-----------VAPAGQSLGEQ-MEAFEAQCLRAALRQHGGEI 412
            NA ER  + L    I              P GQS   Q +   E + + AAL + GG  
Sbjct: 362 ENAVERAVVLLTGEYISERELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGNK 421

Query: 413 KSVMEALQLPRRTLNEKMQR 432
                 L + R+TL  K+ R
Sbjct: 422 TEAARQLGITRKTLLAKLSR 441