Pairwise Alignments

Query, 291 a.a., putative transcriptional regulator from Pseudomonas putida KT2440

Subject, 305 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  142 bits (358), Expect = 9e-39
 Identities = 103/299 (34%), Positives = 149/299 (49%), Gaps = 29/299 (9%)

Query: 3   RLPPLPALHTFLVTAQHCNFTRAGQQLHITQGAVSRQIAALEEHLGYALFKREARGLSLT 62
           R PPL A+  F   A+H +FTRA  +LH+T  AVSRQI +LEE LG  LF+R  R ++LT
Sbjct: 11  REPPLNAVRAFAAAARHLSFTRAALELHVTHSAVSRQIKSLEEFLGVELFERRIRQVALT 70

Query: 63  REGLDWLPRVQQVFALIEQGVREVGEHSTTLQLKA----------PTCVMRWLLPRLMEW 112
            EG       QQ FA +E  + ++G  +  LQ +           P+  +RWL+PRL  +
Sbjct: 71  AEG-------QQFFAEVEPALAQIGAAARALQAQGTARAVRINVRPSFAVRWLIPRLPSF 123

Query: 113 QALRPDV-PVELTTTV--QHGVDLRREGFDAAVVYG-DAPNHGLQVRKLFDEQLTPVCAP 168
               PD+ P  +T+TV  +  VD     FD AV  G +     ++VR    +++  V AP
Sbjct: 124 VEQYPDIEPQVVTSTVMPEQAVD----SFDIAVRRGREGWPPSIKVRPFLKDEVLVVGAP 179

Query: 169 SLREGPVPLQQVEDLARHMLLHPSRDEHDWRLWLQAAGMTLATHGPKQHFETLDMAMAMA 228
           SL +   PL  +  LA H+LL     + DW  W +  G   A    +  F+ L   +  A
Sbjct: 180 SLFK-THPLPDLRSLAAHVLLSAKTRKDDWDAWKKQFGAPRARPAGRLQFDHLHFVLQAA 238

Query: 229 SQGTGVAIGDWSLIGDDLRGGRLCMPF-ALKVLTGKGYYLVSQARSLPPGLLELLDWLE 286
             G G+A+   SL+  DL  GRL  P  AL++   + YY +S      P    + +W E
Sbjct: 239 VDGLGIALAPTSLVSHDLASGRLQSPLPALRMTLDRYYYGLSP--DAAPEAAYVAEWFE 295