Pairwise Alignments

Query, 291 a.a., putative transcriptional regulator from Pseudomonas putida KT2440

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  140 bits (352), Expect = 5e-38
 Identities = 98/293 (33%), Positives = 143/293 (48%), Gaps = 8/293 (2%)

Query: 2   KRLPPLPALHTFLVTAQHCNFTRAGQQLHITQGAVSRQIAALEEHLGYALFKREARGLSL 61
           +++P   AL  F   A++ +FT+A Q+L +TQGAV RQI  LE  L   LF+R  RG+ L
Sbjct: 3   RKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVRL 62

Query: 62  TREGLDWLPRVQQVFALIEQG----VREVGEHSTTLQLKAPTCVMRWLLPRLMEWQALRP 117
           T  GL +  +V      +E+     +R+ G +   L +  PT   +WLLPRL ++Q   P
Sbjct: 63  TEAGLSYSRQVAAQLDAVERDTLSVMRQQGANVIELAV-VPTFGTQWLLPRLKDFQQRHP 121

Query: 118 DVPVELTTTVQHGVDLRREGFDAAVVYGDAPNHGLQVRKLFDEQLTPVCAPSLREGPVPL 177
           +V V LT   +  +      FDAA+ +GDA   G Q  +L  E   PVC+P+L  G   L
Sbjct: 122 EVTVNLTNRTRPFL-FADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQGML 180

Query: 178 QQVEDLARHMLLHPSRDEHDWRLWLQAAGMTLATHGPKQHFETLDMAMAMASQGTGVAIG 237
            +   +A+  LL  S   + WR W  + GM +        +E   M    A    G+A+ 
Sbjct: 181 -EARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIALI 239

Query: 238 DWSLIGDDLRGGRLCMPFALKVLTGKGYYLVSQARSLPPGLLELL-DWLEGQA 289
              LI  +L  GRL +     + + K YYL+   R +    L    DWL  QA
Sbjct: 240 PPFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQA 292