Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  173 bits (439), Expect = 4e-48
 Identities = 105/299 (35%), Positives = 165/299 (55%), Gaps = 3/299 (1%)

Query: 1   MDRLNAMRVFVTVIDLGSQSAAADYLQLSRPVVSRYLAELEDWVGTRLMQRTTRKLSLTA 60
           MDRL AM +FV V++ GS S AA     ++P V++ +A  E  +  RL+ R TR +SLT 
Sbjct: 1   MDRLLAMEMFVRVVETGSFSKAAREFNTTQPTVTKQVAATEARLKVRLLNRNTRGVSLTE 60

Query: 61  AGQETLPRCRQLLELAGDLQAAVQQPEDAPRGALRISVSTSFGQAQLVDAVAAYVRRFPD 120
            G     +C+ ++  A +  + VQ  ++  +G LR+  S +FG+  +V     Y+RR P 
Sbjct: 61  PGALYYEKCKTIVREAEEADSIVQLRQNQAQGLLRVGTSVAFGRRVVVPLALEYMRRHPQ 120

Query: 121 VKVELQMLDRTVNLVDERIDLAIRTSNDVDPSLIARRLSVCRSVVCAAPAYLNERGTPQR 180
           V+++L   DR V+L+ + ID+AIR     D SL AR L     V+ A+P YL + GTP+R
Sbjct: 121 VQLDLSFEDRYVDLIAQGIDVAIRMGKLADSSLGARYLGANPWVMVASPGYLKKHGTPKR 180

Query: 181 VEELSLHNCLTH-AYFGHSLWHF-AVAGQQVAVPVSGNISANEVMTLQRAALAGAGITML 238
            ++LS H  L + +  G   W      G+ V VPVSG   +N +  +  AA  G GI ++
Sbjct: 181 AQDLSAHVALIYSSVVGDEFWRMHTPKGEPVTVPVSGRFRSNNLSAVLAAARDGLGIALM 240

Query: 239 PTYQAADAIRRGELVRLLPEAKPRELNLNAVYTSRKHMPATLRSMLDFLVQRFKDEPAW 297
           P Y A++++  G++  +L +    E  ++AV+ S K +P  +   + FL  RF DE  W
Sbjct: 241 PRYVASESLAAGKVHEVLGDHALPEQEIHAVFPSPKLVPGKVSGFVAFLQGRF-DEGWW 298