Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 315 a.a., LysR family transcriptional regulator from Pseudomonas putida KT2440

 Score =  179 bits (453), Expect = 1e-49
 Identities = 104/291 (35%), Positives = 162/291 (55%), Gaps = 4/291 (1%)

Query: 1   MDRLNAMRVFVTVIDLGSQSAAADYLQLSRPVVSRYLAELEDWVGTRLMQRTTRKLSLTA 60
           MD L  MR F  V  LGS +AAA  L  +   VSR ++ LE  + TRL+ RTTR+++LT 
Sbjct: 1   MDTLQNMRAFSCVAQLGSFTAAAAQLDTTTANVSRAVSNLEAHLQTRLLNRTTRRIALTE 60

Query: 61  AGQETLPRCRQLLELAGDLQAAVQQPEDAPRGALRISVSTSFGQAQLVDAVAAYVRRFPD 120
           AG+  L RC Q+L    + +A        P G L++   T  GQ  +VDA+A Y    PD
Sbjct: 61  AGKRYLMRCEQILTYVEEAEAEASDAHARPAGQLKVHSMTGVGQHFVVDAIARYRETHPD 120

Query: 121 VKVELQMLDRTVNLVDERIDLAIRTSNDV-DPSLIARRLSVCRSVVCAAPAYLNERGTPQ 179
           V  +L M +R  +L+DE  D++I  + ++ D   +++RL +  S+VCA+PAY+ + G   
Sbjct: 121 VTFDLTMANRVPDLLDEGYDVSIVLATELPDSGFVSQRLGITYSIVCASPAYIAQHGVAH 180

Query: 180 RVEELSLHNCL--THAYFGHSLWHF-AVAGQQVAVPVSGNISANEVMTLQRAALAGAGIT 236
           +  +L  H CL           W F    GQ++    S     N    ++ A  +G G+ 
Sbjct: 181 KPADLLKHACLRMVSPVIPLEKWLFDGPEGQEMVNITSSPFMVNTADAMKTAIRSGMGVG 240

Query: 237 MLPTYQAADAIRRGELVRLLPEAKPRELNLNAVYTSRKHMPATLRSMLDFL 287
           +LP Y A + +R G LVR+LPE + +ELNL A+Y SR+++ A +++ +++L
Sbjct: 241 VLPIYSAIEGLRDGSLVRVLPEYRLQELNLYAIYPSRQYLDAKIKTWVEYL 291