Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 309 a.a., LysR family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  217 bits (553), Expect = 2e-61
 Identities = 125/300 (41%), Positives = 173/300 (57%), Gaps = 1/300 (0%)

Query: 3   RLNAMRVFVTVIDLGSQSAAADYLQLSRPVVSRYLAELEDWVGTRLMQRTTRKLSLTAAG 62
           R + +  FV V + GS S AA  L LS+ ++SR ++ LE  +G RL+ RTTR LS T AG
Sbjct: 4   RFDTIIAFVRVAETGSFSEAARRLGLSKSMISRQVSALEADLGVRLLHRTTRSLSPTEAG 63

Query: 63  QETLPRCRQLLELAGDLQAAVQQPEDAPRGALRISVSTSFGQAQLVDAVAAYVRRFPDVK 122
           +  L RC+++L    +    V   +  PRG LR+S   SFG   L   +  ++ R+P+++
Sbjct: 64  RAYLERCQRILADLDEANLLVSHLQAVPRGRLRVSAPLSFGIGHLSACLPGFLERYPEIE 123

Query: 123 VELQMLDRTVNLVDERIDLAIRTSNDVDPSLIARRLSVCRSVVCAAPAYLNERGTPQRVE 182
           +E+   DR V+LV+E  DLA+R     D SLI RRL+  R +  A+PAYL  RGTP+R E
Sbjct: 124 LEMGFTDRHVDLVEEGWDLAVRIGRLADSSLIVRRLAPVRRMAAASPAYLERRGTPRRPE 183

Query: 183 ELSLHNCLTHAYFGHSLWHF-AVAGQQVAVPVSGNISANEVMTLQRAALAGAGITMLPTY 241
           ELS H+CLTH     S W F    G+ V V V G   A+    L+  ALAG G+ +LP++
Sbjct: 184 ELSAHDCLTHGGRVQSEWRFTGDDGKPVQVEVRGRFHADNGDVLRDMALAGLGVVLLPSF 243

Query: 242 QAADAIRRGELVRLLPEAKPRELNLNAVYTSRKHMPATLRSMLDFLVQRFKDEPAWDRDL 301
              D IR G LV LL    P + +LNAVY   +H+   +R+ +D L   F  EP WDR L
Sbjct: 244 FLGDDIRAGRLVPLLEAYVPLDSSLNAVYPHGRHLSPKVRAFVDHLATSFGPEPYWDRGL 303