Pairwise Alignments

Query, 384 a.a., Probable efflux pump periplasmic linker TtgA from Pseudomonas putida KT2440

Subject, 425 a.a., Efflux pump periplasmic linker BepF from Alteromonas macleodii MIT1002

 Score =  163 bits (412), Expect = 1e-44
 Identities = 128/393 (32%), Positives = 193/393 (49%), Gaps = 37/393 (9%)

Query: 8   TALVSAVALATLLSGCKKEEAAP-------AAQAPQVGVVTIQPQAFTLTSELPGRTSAY 60
           T L++ V+L  L++ C  +E  P       A     V V T+  Q  T      GR  + 
Sbjct: 5   TRLLAIVSLTALVAACGGDEQDPSQSMSAGANAGVPVDVATVVSQRLTEWDNFTGRLESP 64

Query: 61  RVAEVRPQVNGIILKRLFKEGSEVKEGQQLYQIDPAVYEATLANAKANLLATRS---LAE 117
           ++  +RP+V+G I    F EG  V++GQ L+ ID   ++A +    A L   +S   LAE
Sbjct: 65  QIVALRPRVSGYIDFVAFDEGEYVEQGQTLFLIDNRTFKAEVDRLTAQLEEAKSRVQLAE 124

Query: 118 ----RYKQLIDEQAVSKQEYDDANAKRLQAEASLKSAQIDLR-------YTKVLAPISGR 166
               R  +L   QAVS++  D   A++ QA ASL   Q  L        + +V APISGR
Sbjct: 125 QNYSRAFKLRKTQAVSEEVLDARLAEKNQALASLNQTQAALEVARLNRGFARVEAPISGR 184

Query: 167 IGRSSFTEGALVSNGQTDAMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKAGDNAA 226
           I R++ TEG  V+ GQT+ +  I   D +Y          L    D      + A   A 
Sbjct: 185 ISRANITEGNFVTAGQTE-LTRIVSTDRLYAYFDIDEQTYLNYLTD------KSAASTAV 237

Query: 227 SVQLV---LEDGSLFKQEGRLEFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKA 283
           S Q V   L + S +   G+++F +  V+ +TG++ +RA+F N +  L+PG+F H +L  
Sbjct: 238 SEQPVAMRLANESDYNHWGQIDFIDNQVNGSTGTLRVRAVFNNEEGRLIPGLFAHLKLAG 297

Query: 284 GVNANAILAPQQGVTRDLKGAPTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRL 343
             +   IL  ++ +  DL      LVVN E+KVE R +K    +GS  +I  GLN  D +
Sbjct: 298 DTDEQGILIKEKAIGTDLNNK-FVLVVNDESKVEYRAVKLGDKVGSMRIITSGLNVNDTI 356

Query: 344 ITEGLQYVRPGVEVKVSDATNVKKPAGPDQANA 376
           + +GLQ VRPG +V  ++      P G + A A
Sbjct: 357 VVDGLQRVRPGAQVAANEV-----PMGDEDALA 384