Pairwise Alignments

Query, 1050 a.a., Probable efflux pump membrane transporter TtgB from Pseudomonas putida KT2440

Subject, 1053 a.a., multidrug efflux RND transporter permease subunit from Dickeya dianthicola ME23

 Score = 1112 bits (2877), Expect = 0.0
 Identities = 572/1035 (55%), Positives = 747/1035 (72%), Gaps = 9/1035 (0%)

Query: 2    SKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDTV 61
            S+FFI RP+FAWVIA+VIML GALSI  LP+ QYP++APP+IAI   YPGASA T++++V
Sbjct: 3    SRFFIHRPVFAWVIAIVIMLAGALSIESLPVAQYPNVAPPSIAIKAGYPGASADTLENSV 62

Query: 62   VQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNPDTAQVQVQNKLNLATPLLPQE 121
             QVIEQQL G+D L Y SS S+S G + ITATF QGTNPDTAQVQVQNK+  AT  LP E
Sbjct: 63   TQVIEQQLTGLDGLLYFSSSSDSSGDVRITATFTQGTNPDTAQVQVQNKVQQATSRLPTE 122

Query: 122  VQQQGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGAQ 181
            VQQQGI VTK+ ++FLL++ L       T  D+A+Y+VSN+QDP+SR  GVG  QVFG+Q
Sbjct: 123  VQQQGITVTKSQQDFLLIMALYDTTDKSTAADIADYMVSNLQDPLSRVEGVGSVQVFGSQ 182

Query: 182  YAMRIWLDPAKLNKFQLTPVDVKTAVAAQNVQVSSGQLGGLPALPGTQLNATIIGKTRLQ 241
            YAMRIWLDP KL  + L P D+ +A+ AQN QVS+G++G  P     QL AT+  ++RL+
Sbjct: 183  YAMRIWLDPIKLAAYSLMPSDISSAIEAQNTQVSAGKIGAQPVGGDQQLTATVTAQSRLK 242

Query: 242  TAEQFESILLKVNKDGSQVRLGDVAQVGLGGENYAVSAQFNGKPASGLAVKLATGANALD 301
            T  QF  I++K    G+ VRLGDVA+V LG E+Y  + + NG PA G+AV L++GANAL 
Sbjct: 243  TPAQFRDIIVKSESSGAMVRLGDVARVELGNEDYTTATRLNGHPAGGIAVMLSSGANALA 302

Query: 302  TAKALRETIKGLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQN 361
            TA+ ++  +    P  P G +  +P D+T  +  S+  V++TL EA+ LV LVM+LFLQN
Sbjct: 303  TAERVKAKVAEFTPQMPQGYEVSYPKDSTDFIKVSVEEVVYTLFEAIALVVLVMFLFLQN 362

Query: 362  FRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVMS 421
             RAT+I  + VPVVLLGTFG+LA  G+SINTLT+F MVLAIGLLVDDAIVVVENVER+M 
Sbjct: 363  LRATLIPAVAVPVVLLGTFGVLAVFGYSINTLTLFGMVLAIGLLVDDAIVVVENVERLMR 422

Query: 422  EEGLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGLS 481
            ++GL P  AT++SM +I  ALVG+ALVLSAV LPMAFFGGSTGVIYRQFSITIVS+M LS
Sbjct: 423  DQGLSPVAATEQSMREISSALVGVALVLSAVFLPMAFFGGSTGVIYRQFSITIVSSMLLS 482

Query: 482  VLVALIFTPALCATMLKPLKKGEHHTAKG-GFFGWFNRNFDRSVNGYERSVGAILRNKVP 540
            V+VAL  TPALCA +LKP+    H  + G GFF  FNR ++     Y   V  ++     
Sbjct: 483  VVVALTLTPALCAALLKPV---AHAPSNGNGFFARFNRGYENLQQRYTGRVAHVITGPWR 539

Query: 541  FLLAYALIVVGMIWLFARIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDQMREYLLK 600
            +L  Y L++V M  LF R+P  FLP EDQG +  Q   PAG++  RT  V +++  Y L 
Sbjct: 540  YLGLYGLLIVVMGVLFLRLPGGFLPNEDQGDVMVQFTLPAGATETRTSKVGERIEHYFLS 599

Query: 601  DEADTVSSVFTVNGFNFAGRGQSSGMAFIMLKPWDER-SKENSVFALAQRAQQHFFTFRD 659
            +E D V ++F ++GFNF+G GQ++GMAF+ LK W  R    NS  A+A+RA Q     RD
Sbjct: 600  EEKDNVEAIFVISGFNFSGSGQNAGMAFVALKNWSLRPGSANSSTAIARRAMQALSAIRD 659

Query: 660  AMVFAFAPPAVLELGNATGFDVFLQDRGGVGHEKLMEARNQFLAKAAQSKILSAVRPNGL 719
            A VF  +PPAV  LG + GF   LQ  G     +L+  R+Q LA+AA++  L+AVRPN L
Sbjct: 660  AQVFTMSPPAVQGLGQSDGFTFELQATGNTDRSRLLALRDQLLAEAAKNPRLAAVRPNDL 719

Query: 720  NDEPQYQLTIDDERASALGVTIADINNTLSIALGASYVNDFIDRGRVKKVYIQGEPSARM 779
               PQ Q+ +D  +  ALG++I+D+ +TLS A G +YVNDFIDRGRVKKVYIQG+  +R 
Sbjct: 720  VQMPQLQVDLDYAKIRALGLSISDVTSTLSSAWGGTYVNDFIDRGRVKKVYIQGDAGSRG 779

Query: 780  SPEDLQKWYVR----NGAGEMVPFSSFAKGEWTYGSPKLSRYNGVEAMEILGAPAPGYST 835
             P DL KW+VR    +G   M PFS+FA   W+YG   LSRYNG+ + E+ G  APG S+
Sbjct: 780  QPSDLDKWFVRGADSSGNSVMTPFSAFAATRWSYGPESLSRYNGLASYELQGTGAPGVSS 839

Query: 836  GEAMAEVERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSI 895
            G+AM E+E +A  LP+G  F+W+ +SY+E+L+  Q  +L+A+S+L VFLCLAALYESWSI
Sbjct: 840  GKAMDEMEALARALPAGTTFAWSELSYQERLASGQAISLYAMSILVVFLCLAALYESWSI 899

Query: 896  PIAVVLVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELHEQGR 955
            P +V++V+PLG++GA++A ++RGL NDVYF V LLTTIGL+AKNAILIVEFA+  + +G 
Sbjct: 900  PFSVMMVIPLGVVGAVLAATVRGLENDVYFQVALLTTIGLSAKNAILIVEFAEAAYRRGA 959

Query: 956  SLYDAAIEACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAIGTGVIGGMISATVLA 1015
            +LY+AA+E  R RLRP++MTS+AFI GV PL +A+GAGA S+ +IG+G++GG ++ATVLA
Sbjct: 960  TLYEAALEGARTRLRPVLMTSMAFIAGVFPLAVATGAGANSRISIGSGIVGGTLTATVLA 1019

Query: 1016 IFWVPLFFVAVSSLF 1030
            IF VP+FFV V  +F
Sbjct: 1020 IFLVPMFFVLVRRVF 1034