Pairwise Alignments

Query, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

Subject, 463 a.a., transporter from Pseudomonas simiae WCS417

 Score =  424 bits (1090), Expect = e-123
 Identities = 228/460 (49%), Positives = 314/460 (68%), Gaps = 8/460 (1%)

Query: 10  VTAFILGGC-SLIPDYQTPEAPVAAQW-PQGPAYSPTQSADVAAAEQGWRQFFHDPALQQ 67
           + A  LGGC +L P Y+ PEAPV+ QW P          AD+      W+QFF D  L Q
Sbjct: 8   LAAMALGGCVNLAPQYERPEAPVSEQWLPAANLPKGKVGADIK-----WQQFFTDRRLAQ 62

Query: 68  LIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTGESGI 127
           L Q +L NNRDLR+A+LN++  +AQYRI+RADLFP V A  SG+  R P ++S TG +  
Sbjct: 63  LQQLALANNRDLRLASLNVEKAQAQYRIKRADLFPTVDAGVSGTHSRTPGSLSNTGTAVT 122

Query: 128 TSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQAD 187
           T  YSA LG+S+YELD+FGRVR+L ++ALE YL+  + RRSTQI+LVA VA A+ T  AD
Sbjct: 123 THDYSAQLGLSSYELDVFGRVRNLRDEALEDYLALTETRRSTQISLVAEVATAWLTLAAD 182

Query: 188 QALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDV 247
                L +ETL +   +Y+LT+RS  +G +SAL V+QA+T VE AR   + Y+  + QD 
Sbjct: 183 NERLLLAQETLTSQLATYDLTQRSYALGGSSALSVAQAQTTVESARGDVASYESQILQDR 242

Query: 248 NSLTVLLGTGIPADLAKPLELD-ADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANANIG 306
           N+L +L+G+ +P  L     L+ A  L ++PAGLPS +LQ+RPD+  AEH LK+AN +IG
Sbjct: 243 NALRLLVGSDLPEALLPGTRLESAAVLVDIPAGLPSSLLQQRPDVLSAEHTLKSANIDIG 302

Query: 307 AARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLDYSKIQ 366
           AARAAF+PSISLTANAGS S  +  LF  G G W F P I++PIF+ GS +A+LD +K++
Sbjct: 303 AARAAFYPSISLTANAGSSSSALAGLFKSGSGAWTFAPSISVPIFDGGSNRATLDSAKVE 362

Query: 367 KDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIGIDS 426
           ++I +  Y++T+QTAF+EV+D LA R T + ++ AQ+ L  A++  + L++  YR G  S
Sbjct: 363 REIQLQTYQQTLQTAFREVADALAVRSTLDRRIAAQQALTDASRKSFELSDALYRGGSQS 422

Query: 427 NLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466
            L  LDAQR+L+SAQQ LI  RL++ ++ + LYK LGGGW
Sbjct: 423 YLEALDAQRSLYSAQQDLITLRLTEQSNRITLYKVLGGGW 462