Pairwise Alignments

Query, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

Subject, 485 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  719 bits (1855), Expect = 0.0
 Identities = 369/483 (76%), Positives = 424/483 (87%), Gaps = 4/483 (0%)

Query: 1   MTKSLLSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFF 60
           M+KSLLSLAVTAF+L GCSLIPDYQ PEAPVAAQ+PQGPAYS  Q+   AAAEQGW+QFF
Sbjct: 1   MSKSLLSLAVTAFVLSGCSLIPDYQRPEAPVAAQFPQGPAYSSAQAPSQAAAEQGWKQFF 60

Query: 61  HDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMS 120
           HDPALQQLIQT+LVNNRDLRVAALN+DAY AQY+IQRADLFPAVSATGSGSR R PA +S
Sbjct: 61  HDPALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAVSATGSGSRSRTPARLS 120

Query: 121 QTGESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANA 180
           QTGES I+SQYSA LG+S+YELDLFGRVRSL+E+AL+ Y ++E+ARRSTQI+LVASVANA
Sbjct: 121 QTGESTISSQYSAGLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANA 180

Query: 181 YYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQ 240
           Y TWQAD+ L KLT++TL  YE+S+ LT RSNEVGVASALD+SQ+RT+VE ARV  ++Y 
Sbjct: 181 YLTWQADKELLKLTQDTLDAYEQSFKLTSRSNEVGVASALDLSQSRTSVENARVALARYT 240

Query: 241 RLVAQDVNSLTVLLGTGIPADL-AKPLELDADQLAEVPAGLPSDILQRRPDIQEAEHLLK 299
           R VAQD NSLT+LLGTG+PA++ +KP  L  D L+EVPAGLPSD+LQRRPDI +AE+ LK
Sbjct: 241 RQVAQDENSLTLLLGTGLPANITSKP--LSDDLLSEVPAGLPSDLLQRRPDIVQAEYNLK 298

Query: 300 AANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKAS 359
           AANANIGAARAAFFPSI+LTA+AG+ SP++G LF GG GTW F PQIN+PIFNAGSL+AS
Sbjct: 299 AANANIGAARAAFFPSITLTASAGTASPNLGGLFKGGSGTWSFAPQINIPIFNAGSLRAS 358

Query: 360 LDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERR 419
           LDYSKIQK+INVA YEK IQT FQEVSDGLAAR+T+++QL AQR  V ANQDYYRLAERR
Sbjct: 359 LDYSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKQQLDAQRGFVAANQDYYRLAERR 418

Query: 420 YRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGWYEQTGQANQQASV 479
           YRIG+DSNLTFLDAQR LFSAQQ+LI DRL+QLTSEVNLYKALGGGW EQT + N+    
Sbjct: 419 YRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNEQTAK-NEPLKE 477

Query: 480 ETP 482
           E P
Sbjct: 478 EAP 480