Pairwise Alignments

Query, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

Subject, 481 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  223 bits (568), Expect = 1e-62
 Identities = 143/470 (30%), Positives = 237/470 (50%), Gaps = 7/470 (1%)

Query: 3   KSLLSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHD 62
           K +  L ++   L  C++ PD+Q P+ P   QW +         A     ++ W   FHD
Sbjct: 2   KRVAWLTLSLISLSACTVGPDFQRPQGPQVTQWSEPQGRQAASRAVNDPLQERWWDVFHD 61

Query: 63  PALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPAN--MS 120
             L  L + +L +N DL++A+  L   RA  ++  A+ +P V+A G   R+R        
Sbjct: 62  EQLSALTRRALTDNLDLKLASSRLQQSRAVRQVTTAERYPNVNANGDYQRKRNSGKGLSD 121

Query: 121 QTGESGITSQYSATLGVSA-YELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVAN 179
            +G +G ++     +G SA +ELD +GRV+  TE A  T   +E  RR+  ++++A  A 
Sbjct: 122 PSGNNGRSAFNQWDMGFSASWELDFWGRVKRETEAADATLQVAENDRRAVLLSVLAETAQ 181

Query: 180 AYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQY 239
            Y   +  Q    +TE+ L     S  L++     GVA+ LDV++A   V     +    
Sbjct: 182 NYIQLRGVQNTRAVTEQNLDVARHSLKLSQLRLADGVATDLDVAEAAAQVAAIEARLPDL 241

Query: 240 QRLVAQDVNSLTVLLGT---GIPADLAKPLELDADQLAEVPAGLPSDILQRRPDIQEAEH 296
           Q+   Q +N+L++L+G     + A L+K   +   Q  +V  GLPS++ +RRPDI++AE 
Sbjct: 242 QQRQDQLINALSLLMGEPPQALHAQLSKDAAVPQTQ-RQVAIGLPSELAERRPDIRQAEA 300

Query: 297 LLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSL 356
            L AA A+IG A+  F+P I+L+ + GS +  +    S G   + F PQ +LP+FN G L
Sbjct: 301 RLHAATASIGVAKGDFYPRITLSGSLGSQAMQLSDFGSWGSRAFAFGPQFSLPLFNGGRL 360

Query: 357 KASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLA 416
           +  L+  + Q+      Y++T+  A+ E+ D L      + +  +  + V+ NQ   R A
Sbjct: 361 QGMLNLREAQQQEAALAYQQTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQIALRTA 420

Query: 417 ERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466
           +++Y  G+   +  L  Q  L + Q+  +        + V LYKALGGGW
Sbjct: 421 QQQYVEGVVDFVNVLTVQSALLATQEQWVDSSTGVSLAMVGLYKALGGGW 470