Pairwise Alignments

Query, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

Subject, 498 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  214 bits (546), Expect = 4e-60
 Identities = 149/469 (31%), Positives = 226/469 (48%), Gaps = 21/469 (4%)

Query: 10  VTAFILGGCSLIPDYQTPEAPVAAQWP-QGPAYSPTQSADVAAA-------EQGWRQFFH 61
           + A +L GC+ +P    PE    AQ+  QG     T  A    A          W   F+
Sbjct: 20  MAALVLAGCATVPS-GLPEIQTTAQFKEQGKDQGATPPAGFTRAVPSESQPRGAWWLAFN 78

Query: 62  DPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQ 121
           DP L  L++ + ++N D++ AA  L   RA  R   AD  P +      +R       + 
Sbjct: 79  DPTLNALVEKADIHNNDIQAAAARLAEARALARTADADRLPQIGLGAGANRGAGLDKATA 138

Query: 122 TGESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAY 181
           +      +   AT    +YE+DLFGR+   ++ A       E   +ST++A+ A  A  Y
Sbjct: 139 STRPATMTNIGATF---SYEVDLFGRLSGASKAARLDAAGREALLQSTRLAVQAQTAQTY 195

Query: 182 YTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQR 241
              +A  A   L  E ++ Y ++  L++R  + G  + LDV++ +T V           R
Sbjct: 196 LQLRALDAERALVREQVEAYRDTLRLSQRREQAGDIAELDVARVQTEVSSTESDALALDR 255

Query: 242 LVAQDVNSLTVLLGTGIPADLAKPLELDADQ----LAEVPAGLPSDILQRRPDIQEAEHL 297
             AQ  ++L VL+G     D A    L  D+    L  +PAG+PS +L RRPD+  A+  
Sbjct: 256 QRAQVEHALAVLVG-----DSASSFGLRTDEWSTVLPNIPAGVPSTVLMRRPDVSAAQSA 310

Query: 298 LKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLK 357
           + AA A +G A+AA+FP ISLT  AG  SP++G LF     +W     ++LPIF+ G  +
Sbjct: 311 VLAAQARVGVAQAAWFPDISLTGAAGYASPEIGDLFKWSARSWGVGALLSLPIFDGGRRE 370

Query: 358 ASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAE 417
           A +  +  Q D  +A Y      AFQEV D LAA +  +EQ   Q   V + Q    L++
Sbjct: 371 AGVQGANAQLDGALASYRTQALVAFQEVEDQLAAIRILQEQSVVQAQAVTSAQRATSLSD 430

Query: 418 RRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466
            RYR G  S L  LDA+R+    ++  +  + +Q  + V L +A+GGGW
Sbjct: 431 TRYRNGYISQLDLLDARRSELRNRRQALQVKSAQYQAAVALVRAIGGGW 479