Pairwise Alignments

Query, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

Subject, 456 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Sphingobium sp. HT1-2

 Score =  372 bits (955), Expect = e-107
 Identities = 210/460 (45%), Positives = 286/460 (62%), Gaps = 15/460 (3%)

Query: 6   LSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPAL 65
           + + ++A +L GC + P Y  P+ PVA  +P G AY+P   A    A   W     D  L
Sbjct: 7   MMMPLSALVLAGCDMAPKYVRPQTPVAPAFPTGEAYAP---ASAEPAGLPWTALIGDTRL 63

Query: 66  QQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTGES 125
           + +I+ +L NNRDLRVA  N+ + RAQY+++RA   P ++   + S  R   N   +   
Sbjct: 64  KTVIERALANNRDLRVALANVQSARAQYKVERAAQLPTITGDAAASFSRQNDNRQNS--- 120

Query: 126 GITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQ 185
                YSA +G SA+E+DLFGRV++LT  ALE+YL++++  RST+I L+A  A+AY T  
Sbjct: 121 -----YSADVGFSAFEIDLFGRVKNLTRSALESYLATQEGMRSTRITLIAETASAYATMA 175

Query: 186 ADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQ 245
           ADQ L  L+ +TL + E S  LT+  N  G+A  LDV QA T VE AR         VAQ
Sbjct: 176 ADQELLALSRQTLASAERSLKLTQTLNTSGLAGKLDVHQAETTVEQARSDIEANVTQVAQ 235

Query: 246 DVNSLTVLLGTGIPADLAKPLELDA--DQLAEVPAGLPSDILQRRPDIQEAEHLLKAANA 303
           D N+L +L+G  +  D   P  LD+     A+VPAGL SD+L +RPD+ +AEH LKAANA
Sbjct: 236 DRNALELLVGAPVE-DALLPQSLDSLLQSTAKVPAGLSSDVLLQRPDVLQAEHQLKAANA 294

Query: 304 NIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLDYS 363
           +IGAARAA FP ISLT   G  S  +  LFS G   W   P  ++PIF  G+ + ++DYS
Sbjct: 295 DIGAARAAMFPKISLTTAIGVASSALSSLFSDGGFAWSAAPSASMPIFG-GAARGNVDYS 353

Query: 364 KIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIG 423
           K Q+D+ VA+YEK IQTAFQEVSDGLA   T + Q  AQ+ LV ANQ YY LA++RYR G
Sbjct: 354 KAQRDLYVAQYEKAIQTAFQEVSDGLARAGTIDRQQAAQQALVTANQRYYALADQRYRAG 413

Query: 424 IDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALG 463
           ID+ L  L +QR+L+SAQQ+ I   L+ + + + LY+ +G
Sbjct: 414 IDTFLNSLTSQRSLYSAQQSAIATELAAVQNRILLYRVIG 453