Pairwise Alignments

Query, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

Subject, 496 a.a., RND efflux system, outer membrane lipoprotein CmeC from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  394 bits (1011), Expect = e-114
 Identities = 232/480 (48%), Positives = 302/480 (62%), Gaps = 30/480 (6%)

Query: 10  VTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADV-AAAEQGWRQFFHDPALQQL 68
           + A  L  CS IP Y+ PEAPVA+Q+P GP   P  +AD    A+  WR+F  D  L++L
Sbjct: 27  LAAAALSACSFIPKYERPEAPVASQFP-GP--QPAAAADAKTGADVAWREFIGDAKLREL 83

Query: 69  IQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTGESGIT 128
           I  +L NNRDLRVA LN++  RAQY+I+RAD FP +    +G+RQ         G  GI 
Sbjct: 84  IALALKNNRDLRVATLNIEQVRAQYQIRRADQFPTIGLAATGNRQ-------PDGNGGIQ 136

Query: 129 SQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQADQ 188
           S YS  L +S +E+D FGR+ +L E AL  YL+SE+AR + Q +LVA+VA+ + + QA+ 
Sbjct: 137 STYSVGLALSTWEIDFFGRLGALKEAALAQYLASEEARHAAQTSLVAAVASTWLSLQAND 196

Query: 189 ALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVN 248
            L  LTE T+ T E+S  L++   + G  SALD+ QA +    A+   +Q +RL A D+N
Sbjct: 197 ELLVLTERTVATREDSLRLSKLRFDNGATSALDLRQAESLTAAAQSALAQQRRLRALDIN 256

Query: 249 SLTVLLGTGIPADLAK-PLELDADQ------------------LAEVPAGLPSDILQRRP 289
           +LT+L+G   PA+L   P  L A                    L EVPAGLPSD+L RRP
Sbjct: 257 ALTLLVGQAPPAELLPVPPTLPAPSANANQVVVPTAPVPAATMLREVPAGLPSDLLTRRP 316

Query: 290 DIQEAEHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLP 349
           DI++AE  L AANANIGAARAAFFP ISLTA+AG+ S  +  LF  G   +   PQ  LP
Sbjct: 317 DIRQAEQQLIAANANIGAARAAFFPRISLTASAGTASSSLSGLFKDGSWGFTLAPQALLP 376

Query: 350 IFNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQAN 409
           IF+AG  +A+LD S   +DI VA+YEK IQTAF+EV+D LA   T  +QL AQ+    A 
Sbjct: 377 IFDAGRNRANLDSSNAGRDIAVAQYEKAIQTAFREVADALAGSATLGDQLSAQQLQATAE 436

Query: 410 QDYYRLAERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGWYEQ 469
            + +RLAE RYR G+ S L  LDAQR+LF+ QQAL   RL+Q  ++VNLYKALGGGW  Q
Sbjct: 437 AERFRLAELRYRNGVASFLDVLDAQRSLFATQQALAQTRLAQQQNQVNLYKALGGGWSGQ 496