Pairwise Alignments

Query, 418 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  257 bits (657), Expect = 4e-73
 Identities = 161/446 (36%), Positives = 240/446 (53%), Gaps = 35/446 (7%)

Query: 1   MSISLPARQLLPGLLAMSCALPAFAANEGGFIEDAKATLNLRNFYINRNFVDPAHPQGKA 60
           M  +L    +L G L ++ +  A A     F+ D+KA L++RNFY N +  D      K 
Sbjct: 1   MKATLNVLSVLTGSLGVALSPLASA----DFLSDSKANLSMRNFYFNNDNRDGTAAPSKT 56

Query: 61  EEWTQSFILDARSGFTQGTVGFGVDVLGLYSVKLDGGKGTTNTHLLPVHGDGRPADDFGR 120
           EEW Q+FIL+ +SGFT GTVGFG+D +G+  + LD G G      +  + DG+  D++ R
Sbjct: 57  EEWGQAFILNYQSGFTDGTVGFGLDAIGMLGITLDSGAGRHVGSSMIPNDDGKATDNWAR 116

Query: 121 LGVALKAKLSETELKVGEWMPVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYAGQFRG 180
            G   KA+ +++EL+ G   P LPIL S+DGR LPQ+F GGQ+TS++I  LTL  GQ + 
Sbjct: 117 GGATAKARFAKSELRYGYLRPNLPILVSNDGRLLPQSFDGGQITSKDIDNLTLIGGQLQH 176

Query: 181 NSPRNDASMEDMSLNGKAAFTSDRFNFGGGEYTFNDKRTMIGLWDAQLKDIYRQQYLNLT 240
            + R  +    +++ G     S+ FN+ G +Y    K  M+  + A L+D Y+Q +  L 
Sbjct: 177 TTGRGSSDRSGLAVAG-GTQESNTFNYAGADYQVT-KDLMLQYYYANLEDYYQQHFAGLI 234

Query: 241 HSQPLGDW-TLGANLGYFIGKEDG-----AERA-------------GKLDNRTASALLSA 281
           H  PLGD+ +L  +L YF    DG     A RA             G++DN T SA    
Sbjct: 235 HVLPLGDYGSLKTDLRYFKTTSDGKNSSVAGRAEGYKLGGYTKNGTGEIDNNTWSAAFIY 294

Query: 282 RYQGHTFYVGLQKVSGDDAWMRVN---------GTSGGTLANDSYNSSFDNAKERSWQVR 332
               H    G Q+VS D  + ++N         G S   L  D    +F  A ER+   +
Sbjct: 295 SLGPHAITAGYQQVSDDSNFAQLNQGGLVNKGEGGSSLYLYTDRTVQTFIQAGERTAFAQ 354

Query: 333 HDFNFATVGVPGLTLMNRYIKGDNVTVGSVDDGKEWARETELAYVVQSGSFKDLSLKWRN 392
           + ++FA++GVPGL     Y+KGD++   S +D  EW R+  L YVVQSG+FK++   WRN
Sbjct: 355 YAYDFASLGVPGLKASVMYLKGDHILTASGNDASEWERDISLDYVVQSGTFKNVGFGWRN 414

Query: 393 STMRRDFSTNAFDENRLIVSYPLNLL 418
              R + + +  D+NR+ V+Y + L+
Sbjct: 415 GVSRSEVARDQ-DQNRVFVNYSIPLM 439