Pairwise Alignments

Query, 418 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 430 a.a., porin from Pseudomonas simiae WCS417

 Score =  356 bits (913), Expect = e-103
 Identities = 193/424 (45%), Positives = 264/424 (62%), Gaps = 13/424 (3%)

Query: 4   SLPAR--QLLPGLLAMSCALPAFAA-NEGGFIEDAKATLNLRNFYINRNFVD-PAHPQGK 59
           SLP R  +L    LA +  L  F+  ++  F ED+ ATL  RN Y NR+F D  +  Q K
Sbjct: 9   SLPVRFSRLTQTALASAATLAGFSPLSQAAFFEDSSATLETRNMYFNRDFRDGTSAQQSK 68

Query: 60  AEEWTQSFILDARSGFTQGTVGFGVDVLGLYSVKLDGGKGTTNTHLLPVHGDGRPADDFG 119
            +EW Q F+L+ +SG+T GTVGFGVD LG+  VKLD     T T LLP H DGR AD++ 
Sbjct: 69  RDEWAQGFMLNLQSGYTDGTVGFGVDALGMLGVKLDSSPDRTGTGLLPTHDDGRAADEYS 128

Query: 120 RLGVALKAKLSETELKVGEWMPVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYAGQFR 179
           +LG+  K K+S TELK+G  +P LPIL+ +DGR LPQTF GG +TS+E   L    G+  
Sbjct: 129 KLGLTGKVKISATELKIGSLIPELPILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLD 188

Query: 180 GNSPRNDASMEDMSLNGK-----AAFTSDRFNFGGGEYTFNDKRTMIGLWD-AQLKDIYR 233
               R+D + ED++LN K     +  T   FNFGG +Y F DK T  G +  AQL D+YR
Sbjct: 189 KAKDRDDTNYEDIALNNKNSRFVSGATGKHFNFGGADYQFADKIT--GSYHFAQLDDVYR 246

Query: 234 QQYLNLTHSQPLGDWTLGANLGYFIGKEDGAERAGKLDNRTASALLSARYQGHTFYVGLQ 293
           Q +L L  S+P+G  T G +L   I  + GA R GK+DN + + L S    GH    G Q
Sbjct: 247 QHFLGLVASRPMGPGTFGTDLRLAISDDTGAARGGKIDNTSLNGLFSYALNGHKLSAGYQ 306

Query: 294 KVSGDDAWMRVNGTSGGTLANDSYNSSFDNAKERSWQVRHDFNFATVGVPGLTLMNRYIK 353
            +SGD A+  V+G S   L N    + F  A+ERSWQ R+DF+FA +G+PGL+ M+RY+ 
Sbjct: 307 HMSGDSAFPYVDG-SDPYLVNFVQINDFAGAEERSWQARYDFDFAKLGIPGLSFMSRYLS 365

Query: 354 GDNVTVGSVDDGKEWARETELAYVVQSGSFKDLSLKWRNSTMRRDFSTNAFDENRLIVSY 413
           GDN+ + + + GKEW R +E+ YVVQ+G+FKD++++ RN+T R ++S    DE RL+VSY
Sbjct: 366 GDNIKLKNGETGKEWERNSEIKYVVQTGTFKDVAVRLRNATYRSNYSARDADEMRLLVSY 425

Query: 414 PLNL 417
            + L
Sbjct: 426 SVAL 429