Pairwise Alignments

Query, 418 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  235 bits (599), Expect = 2e-66
 Identities = 149/418 (35%), Positives = 218/418 (52%), Gaps = 30/418 (7%)

Query: 30  GFIEDAKATLNLRNFYINRNFVDPAHP---------QGKAEEWTQSFILDARSGFTQGTV 80
           GF+E +  ++  RNFY NR+  D   P          G +E W  + I    SGFTQGTV
Sbjct: 31  GFMEGSTLSVLNRNFYFNRDNRDSVAPTHNPSKQADNGYSEAWGHAVITRFESGFTQGTV 90

Query: 81  GFGVDVLGLYSVKLD--GGK--GTTNTHLLPVHGDGRPADDFGRLGVALKAKLSETELKV 136
           G G+D   +  +KLD  GG+  G ++  +LPV  DG+  D++ ++G A K +L +T LKV
Sbjct: 91  GVGLDAFAMLGLKLDTGGGRNGGRSSFDVLPVDRDGQARDEYTKVGGAAKLRLFDTVLKV 150

Query: 137 GEWMPVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYAGQFRGNS-PRNDASMEDMSLN 195
           G+  P  P++ + D R LP++FRG  L +  I  LTL AG+    S P +    E+    
Sbjct: 151 GDVFPANPVVAAGDSRLLPESFRGVTLENSSIKDLTLQAGRLHAMSQPMSSDLRENFVTF 210

Query: 196 GKAAFTSDRFNFGGGEYTFNDKRTMIGLWDAQLKDIYRQQYLNLTHSQPLGD-WTLGANL 254
                 S    +GGG+Y  N+    + L+ ++LKD + Q Y   + S PL +   L    
Sbjct: 211 YGGPVDSPWIAYGGGDYRLNE-HVSVSLFSSRLKDAWNQYYAGTSLSWPLSEALALIGGF 269

Query: 255 GYFIGKEDGAERAGKLDNRTASALLSARYQGHTFYVGLQKVSGDDAWMRVNGTSGGTLAN 314
            Y+   ++G +R G  DN   SA L  R+  HT  +  Q+ +GDD +  +  +    L N
Sbjct: 270 NYYKAVDEGQQRLGAFDNDIWSAKLGVRFGAHTLALTHQRNNGDDDFDYLRQSDSIFLDN 329

Query: 315 DSYNSSFDNAKERSWQVRHDFNFATVGVPGLTLMNRYIKGD--------------NVTVG 360
               S F+  KERSW +R+D N A  GVPGL+ M RY KG+              +V   
Sbjct: 330 SIQYSDFNAPKERSWMLRYDLNMAAYGVPGLSFMTRYGKGNDADYSNANATYMRRDVAGN 389

Query: 361 SVDDGKEWARETELAYVVQSGSFKDLSLKWRNSTMRRDFSTNAFDENRLIVSYPLNLL 418
            + D K W R+ E+ YVVQ+G+ KDLSL+ R +T R     +  DE R+IV YPL++L
Sbjct: 390 PLTDQKRWERDIEVKYVVQTGAAKDLSLRVRQATTRATAFESDLDEVRMIVEYPLSIL 447