Pairwise Alignments

Query, 418 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  287 bits (735), Expect = 4e-82
 Identities = 160/398 (40%), Positives = 218/398 (54%), Gaps = 12/398 (3%)

Query: 26  ANEGGFIEDAKATLNLRNFYINRNFVDPAHPQGKAE--------EWTQSFILDARSGFTQ 77
           A   GFIED+K  L LRN Y N NF D      +A         EW Q F+LD +SGFTQ
Sbjct: 21  AGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSGFTQ 80

Query: 78  GTVGFGVDVLGLYSVKLDGGKGTTNTHLLPVHGDGRPADDFGRLGVALKAKLSETELKVG 137
           GT+G GVD +GL  V+LD G+G + T LLPVH DGR AD+F   G+  KA+L  T +K G
Sbjct: 81  GTLGLGVDAMGLLGVRLDSGRGRSGTGLLPVHDDGRAADEFASAGITAKARLGSTVVKHG 140

Query: 138 EWMPVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYAGQFRGNSPRNDASMEDMSLNGK 197
             +P  P+L  +D R LPQT++G QLTS +I  LTL AG       R+ +    + L+G 
Sbjct: 141 TLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSDSTGLYLDGY 200

Query: 198 AAFTSDRFNFGGGEYTFNDKRTMIGLWDAQLKDIYRQQYLNLTHSQPLGDWTLGANLGYF 257
               S  F+F G +Y  + K+  +  +  +L+  YRQ +  L H  PLG   L  +L YF
Sbjct: 201 GGPASGDFSFAGADYAVS-KQLRLSYFHGELEHFYRQDFAGLVHDLPLGGGVLTTDLRYF 259

Query: 258 IGKEDGAERAGKLDNRTASALLSARYQGHTFYVGLQKVSGDDAWMRVNGTSGGTLANDSY 317
             ++ G    G +DN   S  LS  + GHT   G Q + G+     ++G +  + +N   
Sbjct: 260 KSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQVLDGEAGLPYISGATVYSFSNVGI 319

Query: 318 NSSFDNAKERSWQVRHDFNFATVGVPGLTLMNRYIKGDNVTVGSVDDGKEWARETELAYV 377
              F   +E++W   + +NFA  GVPGLT M RY+ GDN   G  +  KEW R+ E+AYV
Sbjct: 320 -GKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYLSGDNGRSGG-EGIKEWERDAEIAYV 377

Query: 378 VQSGSFKDLSLKWRNSTMRRDFSTNAFDENRLIVSYPL 415
           VQ G  K L +K RN   R DF+    D NRL ++Y +
Sbjct: 378 VQGGPLKGLGVKLRNYVYRSDFARGR-DSNRLYLTYDI 414