Pairwise Alignments

Query, 418 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  346 bits (887), Expect = e-100
 Identities = 191/422 (45%), Positives = 263/422 (62%), Gaps = 14/422 (3%)

Query: 6   PARQLL--PGLLAMSCALPAFAA-NEGGFIEDAKATLNLRNFYINRNFVD-PAHPQGKAE 61
           P R  +  P  +A + AL   A  ++  F ED+ AT   RN Y NR+F D  +  Q K +
Sbjct: 11  PTRSFIARPSAIASALALAGVAPMSQAAFFEDSTATFETRNMYFNRDFRDGTSAQQSKRD 70

Query: 62  EWTQSFILDARSGFTQGTVGFGVDVLGLYSVKLDGGKGTTNTHLLPVHGDGRPADDFGRL 121
           EW Q FIL+  SG+T GTVGFG+D LG+  +KLD     T++ LLP H DG+ AD++ +L
Sbjct: 71  EWAQGFILNFESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDGKAADEYSKL 130

Query: 122 GVALKAKLSETELKVGEWMPVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYAGQFRGN 181
           G+  K K+S+TELK+G  +P LP L+ +DGR LPQTF GG LTS+EI GLT   G+    
Sbjct: 131 GLTGKVKISQTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKA 190

Query: 182 SPRNDASMEDMSLNGK-----AAFTSDRFNFGGGEYTFNDKRTMIGLWD-AQLKDIYRQQ 235
             RND + ED++LN K       F++D    GG +Y F D+ T  G +  AQL DIYRQ 
Sbjct: 191 KDRNDTNWEDLALNNKNGRFGGTFSADNLALGGLDYQFTDRIT--GSYHFAQLDDIYRQH 248

Query: 236 YLNLTHSQPLGDWTLGANLGYFIGKEDGAERAGKLDNRTASALLSARYQGHTFYVGLQKV 295
           ++ +  +QP G  TLGA+L   +  + GA +AG +DN T + +LS    GH      Q++
Sbjct: 249 FIGMVATQPWGPGTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGGHKVSAAWQQL 308

Query: 296 SGDDAWMRVNGTSGGTLANDSYNSSFDNAKERSWQVRHDFNFATVGVPGLTLMNRYIKGD 355
           SG+ A+  V+G +   L N    + F  A ERSWQ R+D+NFA +GVPGLT M RYI GD
Sbjct: 309 SGESAFPYVDG-ADPYLVNFVQINDFAGADERSWQARYDYNFAALGVPGLTFMTRYISGD 367

Query: 356 NVTVGSVDDGKEWARETELAYVVQSGSFKDLSLKWRNSTMRRDFSTNAFDENRLIVSYPL 415
           NV+  +  +GKEW R TEL YVVQSG  K+++++ RN+T R +F+ +A DE RL+VSY +
Sbjct: 368 NVSRAAGGEGKEWERNTELKYVVQSGPLKNVAVRLRNATFRSNFARDA-DEVRLLVSYSV 426

Query: 416 NL 417
            L
Sbjct: 427 AL 428