Pairwise Alignments

Query, 418 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

 Score =  221 bits (562), Expect = 4e-62
 Identities = 156/444 (35%), Positives = 225/444 (50%), Gaps = 45/444 (10%)

Query: 15  LAMSCALPAFAANEG--GFIEDAKATLNLRNFYINRNFVDPAHPQGKAEEWTQSFILDAR 72
           LA++ AL   A   G  GF+ED+K +L+ R  Y N +  +    Q   +E  Q F LD  
Sbjct: 6   LALAVALGVLAQQAGAAGFVEDSKLSLSSRTMYFNDDNRESGIDQ---KESGQGFKLDYL 62

Query: 73  SGFTQGTVGFGVDVLGLYSVKLDGGKGT---TNTHLLPVHGDGRPADDFGRLGVALKAKL 129
           SGFTQGTVGFGVDV  L+ + LDGG+G+    N    P   DG    D+ R+G   KA+ 
Sbjct: 63  SGFTQGTVGFGVDVQALWGIHLDGGRGSRPDANNTFFPSDSDGSAVHDWARIGGNAKARF 122

Query: 130 SETELKVGEWM-PVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYAGQFRGNSPRNDAS 188
           S+TE+  G  + P+LPIL S+DGR LPQTF GG L S+EI  LT+ AGQ      R  ++
Sbjct: 123 SKTEVHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMGRASSN 182

Query: 189 MEDMSLNGKAAFTSDRFNFGGGEYTFNDKRTMIGLWDAQLKDIYRQQYLNLTHSQPLGD- 247
              +S++G A   S++F F GG+Y      T +  + + L+D Y+Q +L  TH   + D 
Sbjct: 183 RTGLSVSG-AFRDSNKFQFAGGDYKLTPDLT-LQYYYSNLEDFYKQHFLGATHVFKIADN 240

Query: 248 WTLGANLGYFIGKEDG---------------AERAGKLDNRTASALLSARYQGHTFYVGL 292
            +   +L YF    DG               A+ +G++DN+T SA+ +    GH   +G 
Sbjct: 241 QSFKTDLRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFTYTLGGHALMLGH 300

Query: 293 QKVSGDDAWMRVN--------------GTSGGT--LANDSYNSSFDNAKERSWQVRHDFN 336
           Q+V  D  ++ +N              G  G +  L  DS  + F  A E +   ++ ++
Sbjct: 301 QQVGDDGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARAGENTTFGQYSYD 360

Query: 337 FATVGVPGLTLMNRYIKGDNVTVGSVDDG-KEWARETELAYVVQSGSFKDLSLKWRNSTM 395
           FA +GVPGL     Y++GD+V   S D    EW R+  + Y +Q G+ K L    R    
Sbjct: 361 FAALGVPGLKASVSYLRGDDVRNRSGDGTYNEWERDARVDYTLQEGTLKGLGFSLRQGVY 420

Query: 396 R-RDFSTNAFDENRLIVSYPLNLL 418
           R    S    D+ R IV+Y  N L
Sbjct: 421 RGSGESALDKDQTRFIVNYTYNFL 444