Pairwise Alignments

Query, 418 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  253 bits (645), Expect = 1e-71
 Identities = 154/448 (34%), Positives = 231/448 (51%), Gaps = 31/448 (6%)

Query: 1   MSISLPARQLLPGLLAMSCALPAFAANEG-GFIEDAKATLNLRNFYINRNFVDPAHP--- 56
           M I +P        L+ S A+ A A ++  GFIE +  T+  RNFY NR+  D   P   
Sbjct: 1   MKIKVPLYLAAVSALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYN 60

Query: 57  ------QGKAEEWTQSFILDARSGFTQGTVGFGVDVLGLYSVKLDGGKGT----TNTHLL 106
                  G +E W  + I    SGFTQGTVGFGVD   +  +KLD G G     ++  +L
Sbjct: 61  SGKGNTNGYSEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVL 120

Query: 107 PVHGDGRPADDFGRLGVALKAKLSETELKVGEWMPVLPILRSDDGRSLPQTFRGGQLTSR 166
           PV   G   D++ ++G A K +L +T +KVG+  P  P++ S D R LP++FRG  + + 
Sbjct: 121 PVDNKGEARDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENT 180

Query: 167 EIAGLTLYAGQFRGNSPRNDASMEDMSLNGKAA-FTSDRFNFGGGEYTFNDKRTMIGLWD 225
            I GLTL  G+    S    +++ D  +        S    +GGG+Y+ ND  T + ++ 
Sbjct: 181 SIQGLTLQGGRLHAMSQPVSSNLNDNFVTFYGGPVNSPWIGYGGGDYSINDNWT-VSVYA 239

Query: 226 AQLKDIYRQQYLNLTHSQPLGD-WTLGANLGYFIGKEDGAERAGKLDNRTASALLSARYQ 284
           +QLKD++ Q Y   +   PL D   L     Y+   ++G +R G+ DN   SA +  RY 
Sbjct: 240 SQLKDVWNQYYAGTSVVYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYG 299

Query: 285 GHTFYVGLQKVSGDDAWMRVNGTSGGTLANDSYNSSFDNAKERSWQVRHDFNFATVGVPG 344
            HT  +  Q+ +GDD +  +  +    + N    S F++ KERSW +R+D NF + G+PG
Sbjct: 300 AHTLALSHQRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPG 359

Query: 345 LTLMNRYIKGDNVTVGS--------------VDDGKEWARETELAYVVQSGSFKDLSLKW 390
           LT M RY +G      +              +D+ K W R+ E+ YVVQ+G  KDLS + 
Sbjct: 360 LTFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRL 419

Query: 391 RNSTMRRDFSTNAFDENRLIVSYPLNLL 418
           R +T R     +  DE R+I+ YPL++L
Sbjct: 420 RQATTRATAFESDLDETRVIIEYPLSIL 447