Pairwise Alignments

Query, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  263 bits (671), Expect = 3e-74
 Identities = 174/493 (35%), Positives = 274/493 (55%), Gaps = 41/493 (8%)

Query: 163 GVVGGDLALDGLVQIINSLN---FGGMGYAFLVNDQGKILVHP-DKDLVMKSLSDLFPQH 218
           G+VG DL+++ +  ++ S +   + G G   L++  G+++ +  D   + +  SDL   +
Sbjct: 230 GIVGADLSVNFIQDMLTSADQKLYNGAGEMALISSNGRLVAYTKDASKLGEKASDLLDSN 289

Query: 219 TPKLTGELT--EVQSD-----GQTRLLTFSPIT-GLPSANWYIGLSV-------DKDKAF 263
                 +L   EV+ D     G   L  F P T G   A W + L +       D  K  
Sbjct: 290 ELTNLNQLKAGEVRYDIDKEHGHIEL--FLPFTIGQADARWTLMLQLPLSAVMADSQKLQ 347

Query: 264 SMLSTFRTSAVIATVVAVVIIIGLLGLLIRVLM-----QPLHTMTRAMEDIAEGEGDLTK 318
           S L   R + +    +A ++I G+ GLL+  L+     +PL  M   + DIA+GEGDLT+
Sbjct: 348 SDLEAQRKTDIFGMTIAGLLIAGI-GLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTR 406

Query: 319 RLHIHSHDEFGVLGNAFNRF-------VERIHSSIREVSSATEQVNEVALRVISASNSSM 371
           RL     DE G + N FN F       + ++ SS+++VS ++E   ++A+R     +  M
Sbjct: 407 RLTSDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQM 466

Query: 372 TNSDEQSNRTNSVAAAINELGAAAQEIAGNAAQASQHASSARLLAEEGQQVVERNIAAMN 431
              D+       VA A++E+ A AQ++A NA QA+Q AS A   A +G ++V     ++ 
Sbjct: 467 VEIDQ-------VATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIG 519

Query: 432 RLSDLIVTSSAHIETLNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAV 491
            L++ I  + + ++TL   + NI  IL  I  I++QTNLLALNAAIEAARAGE GRGFAV
Sbjct: 520 ALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAV 579

Query: 492 VADEVRNLAHRTQESAQQVQTMIEELQVGARESVDTMEQSQRHSQDSMQIANQAGERLDS 551
           VADEVRNLA +TQ++ +++QTMI++LQ G R+ V  ME SQ  + +S+Q A +A E L++
Sbjct: 580 VADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALET 639

Query: 552 VTVRIGEIDGMNQSVATATEEQTAVVEAINMDINEINMLNQEGVENLQATLRACSDLEQQ 611
           +T  +  I+ MN  +A+A EEQ+AV E IN ++  I  +  E       +  A +DL + 
Sbjct: 640 ITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKL 699

Query: 612 AGRLKHLVGSFRI 624
           A + + L+  F++
Sbjct: 700 AEQQRRLINQFKV 712