Pairwise Alignments

Query, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  900 bits (2327), Expect = 0.0
 Identities = 467/629 (74%), Positives = 543/629 (86%), Gaps = 5/629 (0%)

Query: 1   MNKSLRFSHKILLAASLIVILAFSLFTLYNDYLQRNAIREDLENYLAEMGASTSTNIRNL 60
           MNK+LRFSHKILLAASLIVI AF+LFTLYNDYLQRNAIR+DL NYL EMG  T++NI+  
Sbjct: 1   MNKNLRFSHKILLAASLIVIAAFALFTLYNDYLQRNAIRDDLNNYLQEMGDVTASNIQTW 60

Query: 61  FEGRIKLVENLAQNIA--QDPANAETLMGQNALISSFLTVYLGKVDGGFSVRPDAKMPDG 118
             GRI LVEN AQNIA   +P+   +L+ Q  L SSF+  Y+G   G F++RPD KMPDG
Sbjct: 61  LGGRIALVENAAQNIAINPEPSAVASLLEQKTLTSSFMATYVGDSKGAFTIRPDTKMPDG 120

Query: 119 YDPRTRPWYKDGMNASGATLTEPYIDMTTNKMVIGILS---KVSSSVGVVGGDLALDGLV 175
           +DPR RPWYK   +++G+TLTEPYID  T K++I + +   + + S+GVVGGDL+L  LV
Sbjct: 121 FDPRVRPWYKGAQSSNGSTLTEPYIDAATGKLIISVATPSTQGTQSIGVVGGDLSLQTLV 180

Query: 176 QIINSLNFGGMGYAFLVNDQGKILVHPDKDLVMKSLSDLFPQHTPKLTGELTEVQSDGQT 235
             I +LNFGGMGYAFLV+  GK+LVHPDK+LVMK+L+D++P++TPK++ + +EV+++G+ 
Sbjct: 181 DNIGALNFGGMGYAFLVSADGKVLVHPDKNLVMKTLADVYPKNTPKISADFSEVEANGKD 240

Query: 236 RLLTFSPITGLPSANWYIGLSVDKDKAFSMLSTFRTSAVIATVVAVVIIIGLLGLLIRVL 295
            ++TF PI GLPS NW +G+SVDKDK+F+MLS FRTSAVIAT +AVVIII LLG+LIR+L
Sbjct: 241 NIVTFIPIKGLPSVNWDLGISVDKDKSFAMLSEFRTSAVIATFIAVVIIIALLGMLIRIL 300

Query: 296 MQPLHTMTRAMEDIAEGEGDLTKRLHIHSHDEFGVLGNAFNRFVERIHSSIREVSSATEQ 355
           MQPLH MTRAM+DIA+GEGDLT+RL I +HDEFG+LGNAFNRFVERIH+SIREVSSATE 
Sbjct: 301 MQPLHLMTRAMQDIADGEGDLTRRLTIQNHDEFGMLGNAFNRFVERIHTSIREVSSATEH 360

Query: 356 VNEVALRVISASNSSMTNSDEQSNRTNSVAAAINELGAAAQEIAGNAAQASQHASSARLL 415
           VNEVALRV+SASNSSM NSDEQ+NRTNSVAAAIN+LGAAAQEIA NAAQAS  AS AR L
Sbjct: 361 VNEVALRVVSASNSSMVNSDEQANRTNSVAAAINQLGAAAQEIARNAAQASHQASDARHL 420

Query: 416 AEEGQQVVERNIAAMNRLSDLIVTSSAHIETLNSKTVNIGQILEVITSISQQTNLLALNA 475
           AE+GQQVVERNI AMN+LS +I  SS++IE LNSKTVNIGQILEVITSISQQTNLLALNA
Sbjct: 421 AEDGQQVVERNIKAMNQLSSMISASSSNIEALNSKTVNIGQILEVITSISQQTNLLALNA 480

Query: 476 AIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVDTMEQSQRHS 535
           AIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQ MIEELQVGARESV TM +SQRHS
Sbjct: 481 AIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQKMIEELQVGARESVSTMGESQRHS 540

Query: 536 QDSMQIANQAGERLDSVTVRIGEIDGMNQSVATATEEQTAVVEAINMDINEINMLNQEGV 595
            +S+ IAN AGERL+SVT RIGEIDGMNQSVATATEEQT+VVE+INMDI EIN LNQEGV
Sbjct: 541 LESVDIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSVVESINMDITEINTLNQEGV 600

Query: 596 ENLQATLRACSDLEQQAGRLKHLVGSFRI 624
           ENLQ+TLRAC+DLEQQA RLK LVGSFRI
Sbjct: 601 ENLQSTLRACADLEQQAARLKQLVGSFRI 629