Pairwise Alignments

Query, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  231 bits (588), Expect = 1e-64
 Identities = 189/654 (28%), Positives = 310/654 (47%), Gaps = 45/654 (6%)

Query: 5   LRFSHKILLAASLIVILAFSLFTLYNDYLQRN-AIREDLENYLAEMGASTSTNIRNLFEG 63
           ++  +K++LA   +  +  SL  + +    R  A+ + ++    E+      NIR  F+G
Sbjct: 1   MKIKNKLVLAFVSVAFIPVSLVAVISVMNARTEAVDQFIDGSTREI-RQIDGNIRQFFDG 59

Query: 64  RIKLVENLAQNIAQD------------------PANAETLMGQ----NALISSFLTVYLG 101
            ++ V+ +A +                      PA A+T++ +     A   +   + +G
Sbjct: 60  TLQNVDQMATDSVYTSVNTLKNYQPADAASQPMPAEAQTVIERFARYGATHPAAAILSIG 119

Query: 102 KVDGGFSVRPDAKMPDGYDPRTRPWYKDGMNASGATLTEP--YIDMTTNKMV--IGILSK 157
             DG ++  PD      YDPRTRPWYK  M + G T+  P  Y D     +V     L +
Sbjct: 120 LEDGTYAKWPDDPQLAKYDPRTRPWYKAAMASPGKTVRTPAYYYDKDDVALVGTARALLE 179

Query: 158 VSSSVGVVGGDLALDGLVQIINSLNFGGMGYAFLVNDQGKILVHPDKDL----VMKSLSD 213
              + GV    ++L  L +++ S+  G  GY  LV D G +LV P         +K L  
Sbjct: 180 NGKAKGVFVVSVSLKNLTELVKSIKLGESGYVMLVED-GVVLVDPRNAAHNFKPLKGLGA 238

Query: 214 LFPQHTPKLTGELTEVQSDGQTRLLTFSPITGLPSANW-YIGLSVDKDKAFSMLSTFRTS 272
            + Q      G  T+V  DG   +     +   P   W YIGL   ++    M    R +
Sbjct: 239 AYAQLAETPQGS-TDVVIDGVHYMAN---VWTSPGLGWRYIGLIEHREV---MAEATRMT 291

Query: 273 AVIATVVAVVIII-GLLGLLI-RVLMQPLHTMTRAMEDIAEGEGDLTKRLHIHSHDEFGV 330
            + A +V V+++I GL+     +V+++P+  ++  ++ IA+GEGDL   L +   DE   
Sbjct: 292 YLTALIVGVLVLIFGLIAAAFSKVIVKPIGQVSTGLQSIAQGEGDLRHELQVQGKDETAE 351

Query: 331 LGNAFNRFVERIHSSIREVSSATEQVNEVALRVISASNSSMTNSDEQSNRTNSVAAAINE 390
           L   FN+F+  I   I+ + +A+  +   +      +++    +  Q      V+ A NE
Sbjct: 352 LAGWFNKFLAAIRQLIQHIGAASANLQNASKVNSEVAHNMNEAAGRQREAVELVSTAFNE 411

Query: 391 LGAAAQEIAGNAAQASQHASSARLLAEEGQQVVERNIAAMNRLSDLIVTSSAHIETLNSK 450
           + A A E+A + + A++ A +      EG+Q +E     +NRL   +  SS  +  L + 
Sbjct: 412 MVATANEVARSCSGAAESAENGHRRVAEGKQQIEVTTDNVNRLGRRLTESSQAMVELEAG 471

Query: 451 TVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQV 510
           + +I QIL  I +I++QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT +S  ++
Sbjct: 472 SRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGEI 531

Query: 511 QTMIEELQVGARESVDTMEQSQRHSQDSMQIANQAGERLDSVTVRIGEIDGMNQSVATAT 570
           + ++  L+   +E    M      S+ S+     A +  + +   + EI   N  ++ A 
Sbjct: 532 EQLLGTLENKTQEVTQKMGSCLDLSRASVSSIESARDSFEGIQTSVNEIRDQNLQISAAA 591

Query: 571 EEQTAVVEAINMDINEINMLNQEGVENLQATLRACSD-LEQQAGRLKHLVGSFR 623
           EEQ +V E IN  I +I       VE+L  + +  S  L   +  L  LVG F+
Sbjct: 592 EEQHSVAEEINRHIQQI-YDEARLVESLANSAQDDSGRLSNLSDELNGLVGRFK 644