Pairwise Alignments

Query, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

Subject, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  255 bits (651), Expect = 5e-72
 Identities = 186/568 (32%), Positives = 290/568 (51%), Gaps = 24/568 (4%)

Query: 72  AQNIAQDPANAETLMGQNALISSF-LTVYL--GKVDGGFSVRPDAKMPDGYDPRTRPWYK 128
           A  I   P N E L   +    S   T YL  G  DGG++  PD    + YDPR RPWY+
Sbjct: 87  AAQIPLTPTNKELLEIFDQFAKSHPSTAYLSLGLKDGGYASWPDDTKLNNYDPRVRPWYQ 146

Query: 129 DGMNASGATL-TEPYIDMTTNKMVIGILSKVSSS----VGVVGGDLALDGLVQIINSLNF 183
             + A G T+ T  Y     +  +IG +  V+ +    +GVVG D++L  L +++ ++  
Sbjct: 147 AAIAAPGKTVRTGAYYWAPDDVTLIGTVHTVADATGNILGVVGLDVSLKQLTELVRNIKL 206

Query: 184 GGMGYAFLVNDQGKILVHP-DKDLVMKSLSDLFPQHTP--KLTGELTEVQSDGQTRLLTF 240
           G  GY  LV   G +LV P D     K L+DL P +    K    +T+++ DG   +   
Sbjct: 207 GDSGYLMLVEGNGNVLVDPSDAKHNFKPLADLGPNYAELAKRGDGVTQIEIDGVAYMANM 266

Query: 241 SPITGLPSANW-YIGLSVDKDKAFSMLSTFRTSAVIATVVAVV-IIIGLLGL-LIRVLMQ 297
                L    W +IGL + +D+   M    R + +IA + AV+ ++  ++G     V+++
Sbjct: 267 VSSKDL---GWRFIGL-IKRDEV--MAGATRLTWLIAAIAAVLALVFAIVGASFASVIVR 320

Query: 298 PLHTMTRAMEDIAEGEGDLTKRLHIHSHDEFGVLGNAFNRFVERIHSSIREVSSATEQVN 357
           P+  +   +++IAEGEGDLT++L +   DE   L   FN+F+  I   ++ + +A+  + 
Sbjct: 321 PIRGVADGLQEIAEGEGDLTRQLKVQGKDETASLAGWFNQFLSMIAQLVQRIGNASSDLQ 380

Query: 358 EVALRVISASNSSMTNSDEQSNRTNSVAAAINELGAAAQEIAGNAAQASQHASSARLLAE 417
             A      +++    +  Q      V+ A NE+ A A E+A + + A+  A        
Sbjct: 381 SAAADTREVAHNMNQAAGRQREAVELVSTAFNEMVATANEVARSCSAAATSADEGYRDVH 440

Query: 418 EGQQVVERNIAAMNRLSDLIVTSSAHIETLNSKTVNIGQILEVITSISQQTNLLALNAAI 477
           +GQQ +     ++ +LS+ +  S+  ++ L   + NI  IL+ I SI++QTNLLALNAAI
Sbjct: 441 DGQQHIGEATGSVLKLSEDLQRSTQTMQQLEQDSKNINTILDTIRSIAEQTNLLALNAAI 500

Query: 478 EAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVDTMEQSQRHSQD 537
           EAARAG+ GRGFAVVADEVR LA RT +S  ++ +++  L    +E    M+ S   S  
Sbjct: 501 EAARAGDQGRGFAVVADEVRALARRTADSTGEIDSLLGNLARRTQEVTQQMQGSLLVSHT 560

Query: 538 SMQIANQAGERLDSVTVRIGEIDGMNQSVATATEEQTAVVEAINMDINEINMLNQ--EGV 595
           S++   QA +  D +   +  I   N  +ATA EEQ  V E IN  I +I+   Q  EG 
Sbjct: 561 SVERIQQARDSFDKIRGSVDSIRDQNTQIATAAEEQHQVAEEINRHIAQIHADAQLVEGF 620

Query: 596 ENLQATLRACSDLEQQAGRLKHLVGSFR 623
            +   T      L   +G+LK LVG F+
Sbjct: 621 AHSAQT--GSGRLTDISGQLKGLVGRFK 646