Pairwise Alignments

Query, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  273 bits (698), Expect = 1e-77
 Identities = 176/485 (36%), Positives = 268/485 (55%), Gaps = 27/485 (5%)

Query: 166 GGDLALDGLVQIINSLNFGGMGYAFLVNDQG-KILVHPDKDLVMKSLSDLFPQHTPKLTG 224
           G   A   +V+++++ ++G  GY F  + +  ++      D V KS  D    +   +  
Sbjct: 76  GDTAARAQVVKLLSNTSYGKDGYFFGYDSETIRLFKGNSPDGVGKSFKDNRDPNGVYVNR 135

Query: 225 ELTEVQSDGQTRLLTFS----------PITG----LPSANWYIGLSVDKDKAFSMLSTFR 270
           +L +V  DG T  L +S          P  G    LP  +  IG SV+ D   + ++   
Sbjct: 136 DLVKVGKDG-THYLQYSSTQPGQTELVPKMGYTEYLPKWDMVIGTSVNLDGIEAQVAVVE 194

Query: 271 TS----------AVIATVVAVVIIIGLLGLLI-RVLMQPLHTMTRAMEDIAEGEGDLTKR 319
                       +++   V ++++I  +G+L+   +++PLH M   ++DIA GEGDLT+R
Sbjct: 195 AKVQKRMEGVLLSILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRR 254

Query: 320 LHIHSHDEFGVLGNAFNRFVERIHSSIREVSSATEQVNEVALRVISASNSSMTNSDEQSN 379
           L I S DE G L  AFNRFV++IH  +R+++  T Q+  +  +V   +  S    + Q +
Sbjct: 255 LAITSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRH 314

Query: 380 RTNSVAAAINELGAAAQEIAGNAAQASQHASSARLLAEEGQQVVERNIAAMNRLSDLIVT 439
            T+ VA AIN++ +AAQE+A +A  AS  A       +  ++VV+ +IA ++ L + I +
Sbjct: 315 ETDQVATAINQMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRS 374

Query: 440 SSAHIETLNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNL 499
           S   +++L     +I  +L VI SI++QTNLLALNAAIEAARAGEAGRGFAVVADEVR L
Sbjct: 375 SGVSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRAL 434

Query: 500 AHRTQESAQQVQTMIEELQVGARESVDTMEQSQRHSQDSMQIANQAGERLDSVTVRIGEI 559
           A RTQ S Q++Q MI+ LQ G   +V+ M +S      +   AN+AG  LD++   IG I
Sbjct: 435 ASRTQTSTQEIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTI 494

Query: 560 DGMNQSVATATEEQTAVVEAINMDINEINMLNQEGVENLQATLRACSDLEQQAGRLKHLV 619
           + MN  +A+A EEQTAV E IN  +++I +      +  Q   +    L +   RL  LV
Sbjct: 495 NSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLV 554

Query: 620 GSFRI 624
           G FRI
Sbjct: 555 GQFRI 559