Pairwise Alignments

Query, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

Subject, 716 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  227 bits (579), Expect = 1e-63
 Identities = 162/485 (33%), Positives = 249/485 (51%), Gaps = 24/485 (4%)

Query: 162 VGVVGGDLALDGLVQIINSLN---FGGMGYAFLVNDQGKILVH-PDKDLVMKSL----SD 213
           VG +  D++LDGL  +    +   + G     ++   G +  H PD  LV K L    SD
Sbjct: 234 VGSLLVDISLDGLQSVSQDTSRKLYEGQAGISVITPSGLLAGHSPDVRLVGKYLNAIDSD 293

Query: 214 LFPQHTPKLTGELTEVQSDGQTR---LLTFSPITGLPSANWYIGLSVDKDKAFSMLSTFR 270
              +    L  E  +    G+ R   L+TF PI     A W + L + +          R
Sbjct: 294 DAAELVRLLNTEPGKHSLKGEARMKTLVTFEPIPD--DAPWGVLLDIPESVLIEPAEVLR 351

Query: 271 T---------SAVIATVVAVVIIIGLL--GLLIRVLMQPLHTMTRAMEDIAEGEGDLTKR 319
                     S V   +  +  I+GLL   ++ R + +P+  +   + DIA G+G+LT R
Sbjct: 352 RQLDQRNTTGSLVELGLGLLAAIVGLLFIWMMARSVTKPILRVAYMLRDIASGDGNLTLR 411

Query: 320 LHIHSHDEFGVLGNAFNRFVERIHSSIREVSSATEQVNEVALRVISASNSSMTNSDEQSN 379
           L     DE G L   FN  ++++  +I EV  + +     A    + +  +    +EQS 
Sbjct: 412 LAYEKQDELGELVAWFNSLLDKLQPTIAEVKRSVQAARATADESAAIARQTSNGMEEQSR 471

Query: 380 RTNSVAAAINELGAAAQEIAGNAAQASQHASSARLLAEEGQQVVERNIAAMNRLSDLIVT 439
           + + V  A  E+ A AQ++A +AAQA++ A  A     EG  V+ R  ++++ L+  +  
Sbjct: 472 QVHLVVTASQEMNATAQDVARSAAQAAKAACDADQATREGLSVIGRTTSSIDHLAADMSE 531

Query: 440 SSAHIETLNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNL 499
           + + +E+L + +  IG +LEVI SI++QTNLLALNAAIEAARAGEAGRGFAVVADEVRNL
Sbjct: 532 AMSQVESLATHSEKIGMVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNL 591

Query: 500 AHRTQESAQQVQTMIEELQVGARESVDTMEQSQRHSQDSMQIANQAGERLDSVTVRIGEI 559
           A RTQES ++ + +IE LQ G    V  M +SQR +  S+   +QA   L  +   +  I
Sbjct: 592 ARRTQESVEETRIVIEHLQSGTESVVTAMSKSQRLASGSVDQVSQAVTALSQIGDAVTVI 651

Query: 560 DGMNQSVATATEEQTAVVEAINMDINEINMLNQEGVENLQATLRACSDLEQQAGRLKHLV 619
             MN  +A+A EEQ AV E IN +I+ I  + +   +    + R    + + A + + L+
Sbjct: 652 TSMNLQIASAAEEQNAVAEEINCNISIIRDVTESMSDRASESARISDSIYKLANQQQVLM 711

Query: 620 GSFRI 624
             FR+
Sbjct: 712 NQFRV 716