Pairwise Alignments

Query, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

Subject, 696 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  319 bits (817), Expect = 3e-91
 Identities = 219/696 (31%), Positives = 340/696 (48%), Gaps = 86/696 (12%)

Query: 1   MNKSLRFSHKILLAASLIVILAFSLFTLYNDYLQRNAIREDLENYLAEMGASTSTNIRNL 60
           M K      +IL+AAS +V+ AF+ F+ Y D LQ     E +   +   G   + +I N 
Sbjct: 1   MPKKTNLMTRILVAASSLVVAAFAGFSYYIDSLQHRVTTEAVAENIDSSGKQAAQSIANW 60

Query: 61  FEGRIKLVENLAQNIAQDPANAETL--MGQNALISSFLTVYLGKVDGG-FSVRPDAKMPD 117
             GRI L + +A  +A+ P +   L  +  + L + F++ Y G  + G F+  P   +P+
Sbjct: 61  LNGRIMLTQTVAATLAKLPDDEAKLRFLENDVLTAQFMSTYFGNAETGTFTTFPKTPLPE 120

Query: 118 GYDPRTRPWYKDGMNASGATLTEPYIDMTTNKMVIGILSKVSSS---VGVVGGDLALDGL 174
           GYDPR RPWY D + A    LTEPY D +T  ++I     VS      GV G D +LD L
Sbjct: 121 GYDPRKRPWYLDAVKAGKTVLTEPYNDASTGGLIITAAIPVSIDGKLAGVTGSDFSLDSL 180

Query: 175 VQIINSLNFGGMGYAFLVNDQGKILVHPDKDLVMKSLSDLFPQHTPKLTGELTEVQSDGQ 234
           V++I S++ G  GYAFLV+  GKIL+HPD   V K L+DLF   TP ++  +++ + DG+
Sbjct: 181 VKMIKSVDAGTDGYAFLVSKDGKILIHPDPKFVDKPLADLFKVDTPAISSAISQTEIDGK 240

Query: 235 TRLLTFSPITGLPSANWYIGLSVDKDKAFSMLSTFRTSAVIATVVAVVIIIGLLG-LLIR 293
            ++ +F P+ GLPS +WY+G  VD D A+S +  FR +A IATV+A  I+IGLL  +L R
Sbjct: 241 GKITSFIPVAGLPSVDWYLGFVVDSDVAYSAIGQFRLAATIATVLAAAIMIGLLATVLSR 300

Query: 294 VLMQPLHTMTRAMEDIAEGEGDL-------TKRLHIHSHDEFGVLGNAFNRF-------- 338
            +++P+  MT AME +A G  D+       T ++   +        NA  R         
Sbjct: 301 FIVRPVTQMTSAMEGLAAGNLDVGIPGQERTDQIGSMAAAVAVFRSNAMERLRLEGDAEQ 360

Query: 339 ---------VERIHSSIREVSSATEQVNEVALRVISASNSSM---------TNSDEQSNR 380
                     ER  ++ ++ +     V+ +A  +   S+  +         T  D   N 
Sbjct: 361 NRTLSEQERNERERTAAKDAADIQFAVDSLAKGLAHLSDGDLNYRIDTPFVTRIDRLRND 420

Query: 381 -TNSVA---AAINELGAAAQEIAGNAAQASQHASSARLLAEEGQQVVERNIAAMNRLSDL 436
             NSVA   AA++ +G  A  I   A +  Q A       E+    VE   AA+  ++  
Sbjct: 421 FNNSVAKLNAALSTVGQNALAIDAGAGEIRQSADDLARRTEQQAASVEETAAALEEITTT 480

Query: 437 IVTSSAH----------------------------IETLNSKTVNIGQILEVITSISQQT 468
           +  S+                              +E +   +  I  I+ VI  I+ QT
Sbjct: 481 VKDSARRAEEVGRLVDRARGNAEQSGVIVEDAVRAMEGIEKSSSEISNIIGVIDEIAFQT 540

Query: 469 NLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVDTM 528
           NLLALNA +EAARAGEAG+GFAVVA EVR LA R+  +A+ ++T+I              
Sbjct: 541 NLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKAIKTLI-------------- 586

Query: 529 EQSQRHSQDSMQIANQAGERLDSVTVRIGEIDGMNQSVATATEEQTAVVEAINMDINEIN 588
             S    Q  +++   AG+ L+++   + EI+    ++ T++ EQ+  ++ IN  IN I+
Sbjct: 587 NASTSQVQSGVELVGNAGKALETIVREVQEINRHIDAIVTSSREQSTGLQEINTAINTID 646

Query: 589 MLNQEGVENLQATLRACSDLEQQAGRLKHLVGSFRI 624
              Q+    ++    A   L  +A  L  L+  F++
Sbjct: 647 QGTQQNAAMVEEQTAASHGLASEAAALNELLAQFQL 682