Pairwise Alignments

Query, 515 a.a., Muropeptide permease AmpG from Pseudomonas putida KT2440

Subject, 452 a.a., Anhydromuropeptide permease from Xanthobacter sp. DMC5

 Score =  146 bits (369), Expect = 1e-39
 Identities = 86/236 (36%), Positives = 127/236 (53%), Gaps = 2/236 (0%)

Query: 3   RKTWRAALAAYASPSTLVLLLLGFAAGLPYMLVFSTLSVWLREAGVARETIGYASLIGLA 62
           R++ + A+A Y     L + LLGF++GLP  L   TLS+W+++ GV    IG  SL+GL 
Sbjct: 16  RRSLKEAVALYTQRDVLSVSLLGFSSGLPLALTGGTLSLWMKDVGVTLTAIGLFSLVGLP 75

Query: 63  YAFKWVWSPLLDQWRLPLLGG-LGRRRSWLLLSQALVVIGLVGMSLCDPQQHLSWLIAMA 121
           Y  K++W+P+LD   +P+L   LGRRR WLL  Q +++  +  ++L DP      + A A
Sbjct: 76  YTLKFLWAPVLDAVDVPILSRLLGRRRGWLLACQIVLIAAIAALALQDPISAPFGVAACA 135

Query: 122 VLVAFASATQDIAVDAYRLE-IADDQRQAALAASYMAGYRVAALLATAGALFFAEWFGST 180
           + VA ASATQDIAVDA+R+E +     QAA  A Y+ GYR+A L   AG +    +  + 
Sbjct: 136 LAVAIASATQDIAVDAFRVERLESASEQAAGMAGYVTGYRIAMLATGAGVIALVAYLETA 195

Query: 181 GFSYLHKAWAGTYVMFGVMMLPALFTTLVMREPSVPMRTQLSAARYGLVHQMASVF 236
                  +W   Y++    +   +  TL  REP  P+R       + LV      F
Sbjct: 196 LGLPRGTSWFWGYMIAAGCVAIGVIATLFAREPRAPVRAPDEGTGHRLVATTVGAF 251



 Score =  117 bits (293), Expect = 9e-31
 Identities = 73/217 (33%), Positives = 119/217 (54%), Gaps = 5/217 (2%)

Query: 295 GRRGLAPVLTPINDFITRYRWQALLLLGLIATYRMSDTVMGVMANVFYIDMGFTKDQIAS 354
           G R +A  +    +F+ R   QA+++L  +  ++  D   GV+   F +D+GF+K     
Sbjct: 240 GHRLVATTVGAFGEFLRRN--QAVMILLFVMLFKFCDAFAGVLTGPFVLDIGFSKATYVE 297

Query: 355 VSKIFGLVMTLVGAGVGGLLIVRFGIMPILFIGGVASAGTNILFLMLADMGPNLEMLVVT 414
           + K+ G   T+ G+ VG  +     ++  L+I GV    +N+ F + A +GPN  +L   
Sbjct: 298 IVKVVGFGGTIAGSFVGAWIARARPLVTCLWISGVLQITSNLGFTLQAYVGPNEAVLTGV 357

Query: 415 ISLDNFSSGMATSAFVAYLSSLTNLK-FSATQYALLSSIMLLLPRLIGGYSGVIVEKFGY 473
           I ++NF+S + T  FVAYLS+L   +  +ATQYALL+++  +   L+G  SG I E  G+
Sbjct: 358 ILIENFTSAIGTVIFVAYLSALCGAREHTATQYALLTALTAVGRTLLGSSSGAIAEASGW 417

Query: 474 HDFFLITALLGVPTLILIALQWHQEAGRGTPVADDHS 510
             FF++TA+ G+P   L AL W Q  G    +A D +
Sbjct: 418 PLFFILTAVAGLPG--LAALGWLQMKGHFAELARDRA 452