Pairwise Alignments

Query, 939 a.a., protein translocation complex, ATPase subunit SecA from Pseudomonas putida KT2440

Subject, 1127 a.a., Preprotein translocase subunit SecA (ATPase, RNA helicase) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  605 bits (1560), Expect = e-177
 Identities = 402/1121 (35%), Positives = 574/1121 (51%), Gaps = 257/1121 (22%)

Query: 28   DMFAPLLKKLFGSKNEREVKRMLKTVSIVNAFEEKMVALSDEQLRGKTAEFK-------- 79
            D  A  L K+FG+K++R++K +   V  +N   +++ +++DE+LR KT E +        
Sbjct: 3    DFIAKGLTKVFGTKSDRDIKELYPFVGKINTAFDQLSSITDEELRNKTIEIRGVVDSELK 62

Query: 80   -------------ERLAKGET------------------------LDQLLPEAFAVAREA 102
                         E LA  +                         L+++LPEAFAV +E 
Sbjct: 63   TFDDNIATLKAEIEALAPDKVHEKDALFNQIDKVEKDRNEALEVVLEKVLPEAFAVVKET 122

Query: 103  GKR---------------------------------------------VMGMRHFDVQLI 117
             +R                                                M H+DVQLI
Sbjct: 123  ARRFKENGKLVVKANDYDRELSAKKDNVEINGDDAIWHNQWLAAGTEITWDMLHYDVQLI 182

Query: 118  GGMTLHEGMIAEMRTGEGKTLVGTLAVYLNALSGKGVHVVTVNDYLARRDANWMRPLYEF 177
            GG+ LH+G I+EM TGEGKTLV TL  YLNAL+G+GVH+VTVNDYLA+RD+ W  PL+EF
Sbjct: 183  GGIALHKGKISEMATGEGKTLVSTLPAYLNALAGRGVHIVTVNDYLAKRDSEWNAPLFEF 242

Query: 178  LGLSVGIVSAFQPPEE-KRAAYAADITYGTNNEFGFDYLRDNMAFSQDEKFQRELNFAVI 236
             GL+V  +  +QP    +R AY +DI YGTNNEFGFDYLRDNMA + D+  Q + +FA+I
Sbjct: 243  HGLTVDCIDKYQPNSAGRRKAYNSDIVYGTNNEFGFDYLRDNMARNADDLVQGKHHFAMI 302

Query: 237  DEVDSILIDEARTPL------------------------------IISGQAEDSSKLYIE 266
            DEVDS+LID+ARTPL                              +I G    + KL  E
Sbjct: 303  DEVDSVLIDDARTPLIISGPVPRGDEHEFYEMKPRVSTLVDEQRKLIQGYLSTAKKLIGE 362

Query: 267  INR-------------------LIPRLTQH-----IEEVEGQVTQEGH-----------F 291
             N+                   LI  L++      +++ E    Q+             F
Sbjct: 363  GNQKEGGLALFRAYRGMPKYKPLIKYLSEPGIRVVLQKTENYYLQDNKRMMPEADEPLLF 422

Query: 292  TIDEKSRQVELNEAGHQFIEE--------MLAQAGL-LAEGESLYSAHNLGLLTH----- 337
            TIDEKS  V+L + G + I +        +L   G  +AE E   S  +   L       
Sbjct: 423  TIDEKSNTVDLTDNGIEVITKKNEDSSFFILPDIGTEIAEMEKDESIDDKEKLIRKEEII 482

Query: 338  ------------VYAGLRAHKLFHRNVEYIVQDGQVLLIDEHTGRTMPGRRLSEGLHQAI 385
                        V   L+A+ +F ++ EYI+ DG+V ++DE TGR M GRR S+GLHQAI
Sbjct: 483  KDYGVKAQRIHTVNQLLKAYCMFEKDTEYILVDGKVKIVDEQTGRVMEGRRYSDGLHQAI 542

Query: 386  EAKENLNIQAESQTLASTTFQNYFRLYTKLSGMTGTADTEAFEFQSIYGLNVMVIPPNKP 445
            EAKEN+ ++  +QT A+ T QNYFR+Y KLSGMTGTA+TEA EF  IY L+V+VIP NKP
Sbjct: 543  EAKENVKVEDATQTYATITLQNYFRMYHKLSGMTGTAETEAGEFWEIYKLDVVVIPTNKP 602

Query: 446  LARKDYNDLVYLTADEKYAAIIADIKESMKLGRPVLVGTATIETSEHMSNLLKKEGIDHK 505
            + R D +D VY T  EK+ A++ +I E  + GRPVLVGT ++E SE +S +L  + I H+
Sbjct: 603  IQRDDRDDKVYKTVREKFNAVVDEINELTEAGRPVLVGTTSVEISEVLSRMLTLKKIKHQ 662

Query: 506  VLNAKYHEKEAEIIAQAGAPGALTIATNMAGRGTDILLGGNWEAEVAALENPTAEQIAQI 565
            VLNAK H KEAE++A+AG PG +TIATNMAGRGTDI L             P A+     
Sbjct: 663  VLNAKQHAKEAEVVAEAGKPGTVTIATNMAGRGTDIKL------------TPEAK----- 705

Query: 566  KADWQKRHQQVIETGGLHVIASERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDSLMRI 625
                        + GGL +I +ERHESRR+D QLRGR+GRQGD GSS+F++SLEDSLMR+
Sbjct: 706  ------------KAGGLAIIGTERHESRRVDRQLRGRAGRQGDVGSSQFFVSLEDSLMRL 753

Query: 626  FASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEYDDVANEQRK 685
            F S+R+   M  +G++ GE I+H M++ +IE+AQRKVE  NF +RK+LLEYDDV N QR+
Sbjct: 754  FGSERIAKLMDRMGLEEGEVIQHSMISKSIERAQRKVEENNFGVRKRLLEYDDVMNSQRE 813

Query: 686  VIYHMRNSLLAAE-----------NIGDTIVEFRK-----EVLDATISQHIPPQSLPEQW 729
            V+Y  R + L  E           ++ + IVE  K     E L   I   +       + 
Sbjct: 814  VVYKRRKNALMGERLELDILNVMYDVCEGIVEVAKSTEDMESLRMNIYSSLGIDYKFSED 873

Query: 730  DVAGLEASLASDFAIKLPIRQWLDEDDHLYEETL---------REKLLSEITTAYTE--- 777
            D+    A + S        + ++ ++  + +  L         R   + EI    T+   
Sbjct: 874  DIKSKPAPVLSQELFDASYKNYVAKNQRVTDRALPVLKDVYENRGATVKEIMVPITDGIK 933

Query: 778  ----------KEDQAGLEALRTFEKQILLRVLDDLWKDHLSTMDHLRHGIHLRGYAQKNP 827
                        D  G + +R  EK + L ++D  WK+HL  MD L+  +    Y QK+P
Sbjct: 934  QIGVVCNLQSTLDNEGRDLIRAIEKNVTLAIIDQNWKEHLRDMDDLKQSVQNAVYEQKDP 993

Query: 828  KQEYKRESFSLFQELLESIKRDTIRVLSHVQVRREDPAE---EEARLRREAEELASRMQF 884
               YK E+F +F+  +  +  D I  L+  ++ +++P +    +A+ + E +  AS+ + 
Sbjct: 994  LLIYKFEAFEMFKRFVGKLNEDVISFLAKAELPKQNPDQVRAAQAQQQPEPKVQASKEEA 1053

Query: 885  QHAAAP----GLGSEQLSEEGAEVAVASAPVRNDQKLGRNE 921
                 P       +   +  GA+   A AP ++++  GRN+
Sbjct: 1054 NSTLNPHANRAAQAAAAANRGAQ-KQAVAPRKSEKAYGRND 1093