Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

Subject, 364 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

 Score =  159 bits (403), Expect = 7e-44
 Identities = 111/345 (32%), Positives = 167/345 (48%), Gaps = 55/345 (15%)

Query: 19  RVAVLYGGKSAEREVSLKSGAAVIDALSTAGVDVVAIDV-------------------GD 59
           RV +++GG+SAE EVSL+S   ++DAL  +  D V I +                     
Sbjct: 5   RVGIIFGGRSAEHEVSLQSARNIVDALDRSRFDPVLIGIDKAGHWHLNDTSNFLLNQENP 64

Query: 60  DLLARLQS------------------------EKIDRAFIILHGRGGEDGSMQGLLECLG 95
            L+A  QS                        E +D  F I+HG  GEDG +QGLL    
Sbjct: 65  ALIALNQSNRELAVVPGKANQQLVETSGTGLLEHVDVIFPIVHGTLGEDGCLQGLLRMAD 124

Query: 96  IPYTGSGILASALAMDKLRTKQVWQSLGIPTPRHAVL----ASESDCLQASTELGFPLIV 151
           +P+ GS +L SA+ MDK  +K++ +  GI       L    A+ +    A  +LG P+ V
Sbjct: 125 LPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLTRSNAARTSFEAAVNKLGLPMFV 184

Query: 152 KPAHEGSSIGMAKVNSTQELVAAWQDAAKYDSQVLVEQWIHGPEFTIAVLRGQVLPPIAL 211
           KPA++GSS+G++KV    E  AA + A  +D +VLVE  + G E   AVL  +   PIA 
Sbjct: 185 KPANQGSSVGVSKVGDEAEYHAAVELALGFDEKVLVESAVKGREIECAVLGNE--NPIAS 242

Query: 212 GTPHV-----FYDYDAKYIVND-TQYRIPCGLDSVKEQELIDLTARACDAIGIEGWGRLD 265
           G   +     FY YD+KYI +   Q  +P  +     + +  L   A + +G  G  R+D
Sbjct: 243 GCGEIVVSSGFYSYDSKYIDDQAAQVVVPADISQEASERIRGLAIEAFEVLGCSGLARVD 302

Query: 266 VMQDEQGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAIL 310
           V   + G   + E+N+ PG T  S+ P   +AAG+ + +LV  ++
Sbjct: 303 VFLTDDGEVLINEINSLPGFTRISMYPKLWQAAGMSYSELVSRLI 347