Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

Subject, 343 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Sphingobium sp. HT1-2

 Score = 67.8 bits (164), Expect = 4e-16
 Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 14/276 (5%)

Query: 55  IDVGDDLLARLQSEKIDRAFIILHGRGGEDGSMQG--LLECLGIPYTGSGILASALAMDK 112
           + V D   A      +D    +L+  G ++  M    LL   G+P+ G+  +   ++ DK
Sbjct: 59  VAVADSYDALFDKPDVDFVVTLLNRGGFQNSEMLAPLLLSWRGVPFLGASPIVRGVSDDK 118

Query: 113 LRTKQVWQSLGIPTPRHAVLASESDCLQASTELGFP-LIVKPAHEGSSIGMAKVNSTQEL 171
             +K + ++ G+PT    +L      + A  E     L+VKP    +S G+A V+S  E 
Sbjct: 119 YLSKLIARAHGVPTMPARIL--RRGAMPAGPEFQAERLVVKPNASSASWGLAMVDSWAEA 176

Query: 172 VAAWQDAAKYDSQVLVEQWIHGPEFTIAVLRGQ-----VLPPIAL--GTPHVFYDYDAKY 224
            A           VLVE W    +  + V+ G      +LPP+      PH    Y+ K 
Sbjct: 177 HAHADHLHGLGHDVLVEAWAPLLDVAVPVVGGSGGQPWILPPMMYVPADPHRERSYEEKR 236

Query: 225 -IVNDTQYRIPCGLDSVKEQELIDLTARACDAIGIEGWGRLDVMQDE-QGRFWLLEVNTA 282
            +++     +    D      L D+T R    +    +GR +   D   G    +EVN +
Sbjct: 237 GLIDAGDDPLILVEDHDLRTRLEDMTRRLLPELWPFDYGRFEYRYDPASGELLFMEVNLS 296

Query: 283 PGMTDHSLVPMAARAAGLDFQQLVLAILAESVATRG 318
             +     +  +A + G+D Q LV  I+A S+A  G
Sbjct: 297 CNLWSKKTISRSAASIGVDHQSLVETIVAHSLARHG 332