Pairwise Alignments

Query, 450 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Pseudomonas putida KT2440

Subject, 437 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (EC 6.3.2.9) from Sphingobium sp. HT1-2

 Score =  196 bits (497), Expect = 2e-54
 Identities = 152/464 (32%), Positives = 226/464 (48%), Gaps = 47/464 (10%)

Query: 5   LIASDQFR----IVVGLGKSGMSLVRFLASRGIAFAVADTREQPPELETLRRDYPQVEVR 60
           +I S  F+     V+GL +SG++ V  L + G      D+RE+        R     +  
Sbjct: 1   MIVSQAFKGKTYAVLGLARSGLATVETLVASGARVVAWDSREEA-------RAAVADKAE 53

Query: 61  CGE-LDVDFLCRANELYVSPGLALAT-PALQQAAARGVKLSGDIELFA--RHAKAP--IV 114
            G+ +++D L   + + VSPG+ L   P   +A   GV + GDIELFA  R    P  +V
Sbjct: 54  LGDPMEID-LAGFDGIVVSPGVPLNKHPIAMRAKIAGVPIIGDIELFALARPTLPPHKVV 112

Query: 115 AISGSNAKSTVTTLVGEMAAKAGKRVAVGGNLGTPAL-----DLLADDIELYVLELSSFQ 169
            I+G+N KST T L+  +  +AG    +GGN+G P L     +     + +YVLELSS+Q
Sbjct: 113 GITGTNGKSTTTALIHHIIEQAGFPARMGGNIGLPILGQEPLEPNLHGVGVYVLELSSYQ 172

Query: 170 LETTDQLNAEVATVLNISEDHMDRYSGLPAYHLAKHRIF--RGARQV-VVNRQDALSRPL 226
           ++ T  L+ +VA +LNI+ DH+DRY+G   Y  +K R+F  + A  V V+  +D  SR +
Sbjct: 173 IDLTHSLDCDVAVLLNITPDHLDRYNGFAGYVASKARLFAMQSADHVAVIATEDEPSRGI 232

Query: 227 PVEGRPCWTFGLNPPDFKAFGLREVDGEKYLAFEFQTLMPARELKVRGAHNQSNALAALA 286
                        P   +     ++D E  L +            ++G HN  NA  A+A
Sbjct: 233 AASA---------PAQLREVKAADIDPEAQLGWP----------SLQGPHNAQNAAVAIA 273

Query: 287 LGHAAGLPFEPMLEALREFGGLAHRCQWVRERNGVNWYDDSKATNVGAALAAIEGLGA-D 345
           +G A G+    ++ AL  +  L HR Q V   NGV + +DSKATN  +   A+    A D
Sbjct: 274 VGRALGIDDATIMAALASYASLPHRMQAVGTHNGVLYVNDSKATNAASTAPALGAWPARD 333

Query: 346 IEGKLVLIAGGDGKGAEFTALREPVKRFCRAVVLLGRDAERLAEALGDAVPLVRVKTLDD 405
            + ++  I GG  K                A   +G      A+ L   + +   + L  
Sbjct: 334 GKPRIHWILGGVAKSDNLDECAPYYGNIAHAYT-IGEAGHMFADLLRPHMAVDDSEMLSA 392

Query: 406 AVQQCAELAQAGDAVLLSPACASLDMFKNFEERGRLFAQAAGGL 449
           AV++ A +AQ GD VLLSPACAS D F++FE RG  FA A   L
Sbjct: 393 AVRRAARIAQPGDVVLLSPACASFDQFRDFEARGDAFAAAVNAL 436