Pairwise Alignments

Query, 455 a.a., D-alanyl-D-alanine-adding enzyme from Pseudomonas putida KT2440

Subject, 482 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase (EC 6.3.2.10) from Variovorax sp. SCN45

 Score =  283 bits (723), Expect = 1e-80
 Identities = 181/464 (39%), Positives = 265/464 (57%), Gaps = 27/464 (5%)

Query: 5   LSLSQLTTALKGQHIGGDAT--FTGVSIDSRSVSAGQLFVALAGPRFDGHDYLADVKAKG 62
           ++L+Q    + G  + GDA+     V  D+R+++AG LFVAL G RFD +++LA+ K +G
Sbjct: 9   ITLAQAQQWIPGSRLVGDASTVIARVHTDTRTLAAGDLFVALKGERFDANEFLAEAKKQG 68

Query: 63  AVAALVEREVADVDLPQLQVADCRLALGQLGALNRAAFDKPVVAITGSSGKTTVKEMLAS 122
           AVAA+    +    L  L+V D  LALG LGA  RA F  P++A+TGS+GKTTV +M+A+
Sbjct: 69  AVAAIAHHGLEAAGLAGLEVPDSLLALGALGAGWRAQFTLPLIAVTGSNGKTTVTQMIAA 128

Query: 123 IL----RTRG-LVHATRGNLNNDLGAPLTLLEIAPEHSAAVIELGASRIGEIRYTVGLTQ 177
           +L      RG    AT GN NN++G PLTLL +  +H  AV+ELG +  GEI     +++
Sbjct: 129 VLFAARADRGESALATAGNFNNEIGVPLTLLRLRAQHQRAVLELGMNHPGEIARLAAMSR 188

Query: 178 PQVVIINNAGTAHVGEFGGPDKIVEAKGEILEGLGQGGIAILNLDDKAFDIWKARA---G 234
           P + ++NNA   H       + +      +   L   G A+    D    +W   A   G
Sbjct: 189 PTIALVNNAQREHQEFMATVEAVAVENAAVFAVLPDDGTAVFPYGDAFTSLWTDMAHAGG 248

Query: 235 AHKVVSFARSNPKADFHASDIGRDA----RGCPSFTLHGAGETVAVQLNVLGEHNVSNAL 290
           + + ++F       +   +DI  D     +G  +  +     +   +L++ G HNV NAL
Sbjct: 249 SRRCMTF------GEHQDADISLDGAEWKQGAWAVRIRTPIGSFDARLHIAGRHNVVNAL 302

Query: 291 AAAAAAHAVGLSLSGIAAGLAAVQPVKGRTVAQ--IAPNG--VRVIDDSYNANPTSMCAA 346
           AA A A A G+S   IAAGL+A +PVKGR+ A   +  +G  V ++DDSYNANP S+ AA
Sbjct: 303 AATACALAAGVSTDIIAAGLSAFEPVKGRSRASEIVLADGRAVTLVDDSYNANPDSVIAA 362

Query: 347 IDILAGFSGRTVLVLGDIGELGQWAEEGHRQVGDYARGK-VDALYAVGSNMTHAVKAF-- 403
           ID+LA   G  +LVLGD+GE+G+ + E H +VGD+AR + ++A+Y  G+   H V AF  
Sbjct: 363 IDVLAALPGPRLLVLGDMGEVGERSPEFHAEVGDWARQRGIEAVYTFGNATAHTVAAFRG 422

Query: 404 GANGRHFATQAELIDAVSAENASDTTILIKGSRSAAMENVVAAL 447
            A+GRHF     L  AV A      ++L+KGSRS  ME +V A+
Sbjct: 423 DADGRHFNEFDALGAAVLARLPHVGSVLVKGSRSMKMERMVQAI 466