Pairwise Alignments

Query, 403 a.a., Cytochrome b from Pseudomonas putida KT2440

Subject, 424 a.a., Cytochrome b/c1 from Xanthobacter sp. DMC5

 Score =  397 bits (1020), Expect = e-115
 Identities = 198/400 (49%), Positives = 262/400 (65%), Gaps = 12/400 (3%)

Query: 3   KFMDWIDARFPATKMWEDHLSKYYAPKNFNFLYFFGSLALLVLVNQIVTGVWLTMSFTPS 62
           K   W ++R P   +       Y  PKN N+++ FG++   +LV QIV+GV L M +   
Sbjct: 12  KVAQWFESRLPIVGLIHSSAIAYPVPKNLNYMWTFGAILSFMLVCQIVSGVVLAMHYVAY 71

Query: 63  AEEAFASVEYIMRDVEYGWILRYLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWLFG 122
           A  +FA VE+IMRDV YGW++RY+H+ GAS FFI VY+H+FRG+ YGSY+ PRE++W+ G
Sbjct: 72  APVSFARVEHIMRDVNYGWLIRYIHANGASMFFIAVYIHIFRGMYYGSYKAPREVLWILG 131

Query: 123 MLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTQWIRGDYLISGITLN 182
           ++IYL +MA AFMGY+LPWGQMS+WGA VI +LF AIP +G  + +W+ G Y +   TLN
Sbjct: 132 VIIYLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPWVGTTIVEWLWGGYSVGDPTLN 191

Query: 183 RFFALHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKKKDENGIPLDGIPFHPYYTV 242
           RFF+LH + LP +I G+V LHI ALH VG NNPDGVDIK       +  D +PF PY T+
Sbjct: 192 RFFSLHYL-LPFMIAGVVGLHIWALHHVGQNNPDGVDIK------NVAKDSVPFTPYATI 244

Query: 243 KDIVGVVVFLFVFCAVVFFFPEMGGYFLEKPNFEQANAFKTPEHIAPVWYFTPFYAILRA 302
           KDI  +VVFL  F   +F+ P    Y     N+  AN   TP HI P WYF PFYAILR+
Sbjct: 245 KDIFAMVVFLIFFSWFIFYIP---NYLGHSDNYIPANPLSTPAHIVPEWYFLPFYAILRS 301

Query: 303 VPDKLMGVIAMGAAIAVLFVLPWLDRSPVRSMRYKGWISKVFLLVFCVSFVILGVLGVLA 362
           +PDKL GV+AM AAIAVL  LPWLD S VRS +Y+  + + F  VF V  V+LG +G   
Sbjct: 302 IPDKLGGVLAMFAAIAVLAFLPWLDTSKVRSAKYRP-LFRQFFWVFAVVAVLLGYMGSQP 360

Query: 363 PTPGRTLLSQVCTVLYFAYFL-LMPFYTRLEKTKPVPERV 401
              G  ++S++ T  YF +FL ++P     E+ KPVP  +
Sbjct: 361 AEGGALIISRILTAYYFIHFLVILPLLGLFERPKPVPASI 400