Pairwise Alignments

Query, 403 a.a., Cytochrome b from Pseudomonas putida KT2440

Subject, 478 a.a., Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) from Variovorax sp. SCN45

 Score =  522 bits (1345), Expect = e-153
 Identities = 259/458 (56%), Positives = 317/458 (69%), Gaps = 59/458 (12%)

Query: 3   KFMDWIDARFPATKMWEDHLSKYYAPKNFNFLYFFGSLALLVLVNQIVTGVWLTMSFTPS 62
           K ++W+D RFP +K+W D   KYYAPKNFNF Y FGSLA+LVLV QIVTG++L M + P 
Sbjct: 16  KLLNWVDNRFPLSKLWNDQWGKYYAPKNFNFWYIFGSLAMLVLVIQIVTGIFLVMHYKPD 75

Query: 63  AEEAFASVEYIMRDVEYGWILRYLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWLFG 122
           A +AFASVEYIMRDV +GW++RY+HSTGASAFFIVVYLHMFRGL+YGSY+KPREL+W+FG
Sbjct: 76  AAQAFASVEYIMRDVPWGWLIRYIHSTGASAFFIVVYLHMFRGLMYGSYRKPRELIWVFG 135

Query: 123 MLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTQWIRGDYLISGITLN 182
             I+L LMAEAFMGYLLPWGQMSYWGAQVI++LF AIP IG DL   IRGDY++S  TLN
Sbjct: 136 CAIFLCLMAEAFMGYLLPWGQMSYWGAQVIVNLFAAIPFIGPDLALLIRGDYVVSDATLN 195

Query: 183 RFFALHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKKKDENGIPLDGIPFHPYYTV 242
           RFF+ HV+A+P+V+LGLVV H++ALHEVGSNNPDG++IK K+  +G PLDGIP HPYYTV
Sbjct: 196 RFFSFHVIAVPLVLLGLVVAHLIALHEVGSNNPDGIEIKAKRGPDGHPLDGIPSHPYYTV 255

Query: 243 KDIVGVVVFLFVFCAVVFFFPEMGGYFLEKPNFEQANAFKTPEHIAPVWYFTPFYAILRA 302
            DI GVVVFL +F AV+FF PE GGYFLE  NF  A++ KTP HIAPVWYFTPFY++LRA
Sbjct: 256 HDIFGVVVFLTIFSAVIFFAPEAGGYFLEYNNFIPADSLKTPNHIAPVWYFTPFYSMLRA 315

Query: 303 VPD-----------------------------------------------KLMGVIAMGA 315
             D                                               K  GV+ MG 
Sbjct: 316 TTDDMVNVFSLIIAAGAILNFVKGKSGTAFKVALIVVAAVVIFLLKSFDAKFWGVVVMGG 375

Query: 316 AIAVLFVLPWLDRSPVRSMRYKGWISKVFLLVFCVSFVILGVLGVLAPTPGRTL------ 369
           ++ +LF LPWLD S V+S+RY+    K     F   F+ILG LG+  P     L      
Sbjct: 376 SVIILFFLPWLDHSEVKSIRYRPSWHKYVYGAFVFFFLILGYLGIQPPGVWGNLVIGSFA 435

Query: 370 ------LSQVCTVLYFAYFLLMPFYTRLEKTKPVPERV 401
                 +SQ+ T++YF +FLLMP+++R  + K VPERV
Sbjct: 436 LDIAQTISQIGTLVYFGFFLLMPWWSRKGEFKTVPERV 473