Pairwise Alignments

Query, 403 a.a., Cytochrome b from Pseudomonas putida KT2440

Subject, 430 a.a., Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) from Sphingobium sp. HT1-2

 Score =  381 bits (979), Expect = e-110
 Identities = 199/407 (48%), Positives = 260/407 (63%), Gaps = 21/407 (5%)

Query: 5   MDWIDARFPATKMWEDHLSKYY-APKNFNFLYFFGSLALLVLVNQIVTGVWLTMSFTPSA 63
           M W+D + P  ++  + +   Y  P+N N+ + FG LA L LV QIVTGV + M +  + 
Sbjct: 16  MQWVDEKLPLPRLVYNAVGAGYPVPRNLNYFWNFGVLAGLALVIQIVTGVVMAMHYGANT 75

Query: 64  EEAFASVEYIMRDVEYGWILRYLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWLFGM 123
             AF +VE  MRDV  GW++RY H+ GAS FFIVVYLH+FRGL +GSY+ PRE+VWL G+
Sbjct: 76  LVAFGTVEQTMRDVNAGWLMRYAHANGASFFFIVVYLHIFRGLYFGSYKAPREMVWLLGL 135

Query: 124 LIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTQWIRGDYLISGITLNR 183
           +I+L +MA AFMGY+LPWGQMSYWGA+VI  LFGAIPV+G+ +  W+ G +     +LNR
Sbjct: 136 VIFLLMMATAFMGYVLPWGQMSYWGAKVITGLFGAIPVMGEPIQTWLLGGFAPGNASLNR 195

Query: 184 FFALHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKKKDENGIPLDGIPFHPYYTVK 243
           FF+LH + LP VI  +V+LHI ALH  GS+NP GV++K        P D +PFHPYYT K
Sbjct: 196 FFSLHFL-LPFVIAAVVILHIWALHIPGSSNPTGVEVKG-------PQDTVPFHPYYTAK 247

Query: 244 DIVGVVVFLFVFCAVVFFFPEMGGYFLEKPNFEQANAFKTPEHIAPVWYFTPFYAILRA- 302
           D  G  +FL +F  ++FF P    Y     N+ +AN   TP HI P WYF PFYAILRA 
Sbjct: 248 DGFGAGIFLILFAILLFFAP---NYLGHPDNYIEANPLSTPAHIVPEWYFWPFYAILRAF 304

Query: 303 ------VPDKLMGVIAMGAAIAVLFVLPWLDRSPVRSMRYKGWISKVFLLVFCVSFVILG 356
                 VP KL+GV+AM A+I +LF LPWLD SPVRS  Y+    K F  +  +  +ILG
Sbjct: 305 TVDFFFVPAKLLGVLAMFASILLLFFLPWLDTSPVRSGSYRPTF-KTFFWILVLDVLILG 363

Query: 357 VLGVLAPTPGRTLLSQVCTVLYFAYFL-LMPFYTRLEKTKPVPERVT 402
             G         ++SQV    YFA+FL ++P   R EK  P+P  +T
Sbjct: 364 YCGGAPAEEPYVMISQVAAAYYFAHFLIILPMIARFEKPLPLPNSIT 410