Pairwise Alignments

Query, 402 a.a., quality control serine endoprotease DegS from Pseudomonas putida KT2440

Subject, 460 a.a., Periplasmic pH-dependent serine endoprotease DegQ from Acinetobacter radioresistens SK82

 Score =  231 bits (589), Expect = 3e-65
 Identities = 124/333 (37%), Positives = 203/333 (60%), Gaps = 6/333 (1%)

Query: 69  VSYADAVTLAAPAVANLYTTKVVNKSAHPLFEDPQF-RRFFGDN--LPKQR--RWESSLG 123
           V +++ V   +PAV ++   K + +      + P+  RRFFG+   +P+Q+  + ++  G
Sbjct: 28  VDFSNLVEQVSPAVVSVNVVKKMTQEELLQQQVPELLRRFFGNQVIIPQQQVPQEKTGYG 87

Query: 124 SAVIMSPEGYLLTNNHVTSGADQIVVALKDGRETLARVIGSDPETDLAVLKIDLKNLPAI 183
           SA  +S +GYLLTN+HV   A +I + L D RE  A V+GSD  TD+A+LK++  + PA+
Sbjct: 88  SAFFISKDGYLLTNHHVVENASRISITLNDRREIDATVVGSDERTDVALLKVNGSSFPAL 147

Query: 184 TIGRSDTIHIGDVSLAIGNPFGVGQTVTMGIISATGRNQLGLNNYEDFIQTDAAINPGNS 243
            IG  D + +G+  LAIG+PFG   + + GI+SA  R+ +G  +   FIQTD A+NPGNS
Sbjct: 148 RIGNVDQLKVGEPVLAIGSPFGFDYSASAGIVSAKSRSMMGETSVP-FIQTDVALNPGNS 206

Query: 244 GGALVDANGNLIGINTAIFSKSGGSQGIGFAIPVKLALEVMKSIVEHGQVIRGWLGIEVQ 303
           GG L +  G ++G+N+ IFS +GG  G+ F+IP+ +A++V + +  +G+VIR +LG+ +Q
Sbjct: 207 GGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMDVAEQLKSNGKVIRSYLGVMLQ 266

Query: 304 PLSQELAESFGMKDRPGIVVAGIFREGPAAKAGLHLGDVILSINGEPAGDGRKSMNQVAR 363
            + + LAE++ +    G ++  +    PAA+AGL  GD+IL ING         +N + R
Sbjct: 267 DIDRNLAEAYKLPKPEGSLITQVAPNSPAARAGLKAGDIILQINGMAISRTSDLLNYLNR 326

Query: 364 IKPNEKITIEVMRNGQQLKLIAEVGLRPPPAPA 396
             PN+ I ++V+R+ +   + A +   P   PA
Sbjct: 327 QAPNQSIRLQVLRDEKLSNITATLTTAPDNTPA 359



 Score = 43.1 bits (100), Expect = 2e-08
 Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 298 LGIEVQPLSQELAESFGMKDRPGIVVAGIFREGPAAKAGLHLGDVILSINGEPAGDGRKS 357
           LGI ++ L++  +   G+    G+ +  + R G AA++ L   D+I  IN  P  +  + 
Sbjct: 372 LGIAIRNLTEAESRQLGVDG--GVYIQEVMRGGLAAQSRLMPEDIITQINNTPVRNSDEF 429

Query: 358 MNQVARIKPNEKITIEVMRNGQQLKLIAEVGLR 390
           +N V+++K N    + ++R GQ+    A +GLR
Sbjct: 430 VNAVSKLKKNTVARVALIRQGQR----AILGLR 458