Pairwise Alignments

Query, 392 a.a., putative amino acid ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 44/120 (36%), Positives = 76/120 (63%), Gaps = 8/120 (6%)

Query: 255 VLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQAL 314
           +L+P  L   L L +Y+ A+++EIVR  I+S+  GQT AA+SLG+  G  +R++++PQA+
Sbjct: 84  ILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAAQSLGMTPGVAMRQIVLPQAV 143

Query: 315 RVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISI 374
             +IPPL ++++ L KNS+L +         L    V+++  + I V   ++ VYLAI++
Sbjct: 144 VRMIPPLGNEFIALIKNSALVS--------LLTIHDVMHEGQKIISVSYRSLEVYLAIAV 195



 Score = 38.9 bits (89), Expect = 1e-07
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 86  GLLNTLLVTFIGVILATILGFIIGVARLSP--NWMINKLATVYVETFRNIPPLLQILFWY 143
           G L T+ +T   + L  +LG ++G+ RL+P   W I    T YV   R  P L+Q+   +
Sbjct: 18  GALVTVEITACALALGCVLGLLVGIGRLNPKRRW-IYGACTAYVAAIRGTPLLVQLFILF 76

Query: 144 FAV 146
           F +
Sbjct: 77  FGL 79