Pairwise Alignments

Query, 392 a.a., putative amino acid ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 262 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 6/145 (4%)

Query: 248 FNFVGGWVLIPEL-----LALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREG 302
           F F+   VLIP L      +  +AL     A+ AE +R+G+ +V  GQTEA+RSLGL  G
Sbjct: 112 FVFLALPVLIPALQLDDFTSACVALAFNAGAYNAESIRAGLLAVPRGQTEASRSLGLSRG 171

Query: 303 PTLRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVI 362
            T   V++PQA +V +PPL + +++L K+SSLA  IG  E+ ++    +   T Q +  +
Sbjct: 172 YTFFDVVLPQAFKVSLPPLVNNFISLLKDSSLAYAIGVVELTNV-GNRMQAATFQPLPAL 230

Query: 363 AITMSVYLAISISISLLMNWYNKRI 387
           A    +YL ++ +++ + N    R+
Sbjct: 231 ATIAVIYLLLTTALTQISNAVENRL 255